jlund256/xeno_rna-seq : latest

Latest release: about 1 year ago - 3,295 downloads - 902 dependencies

JSON

Dependencies

debian/adduser 3.118
debian/apt 1.8.2
debian/awscli 1.16.113-1
debian/base-files 10.3 deb10u1
debian/base-passwd 3.5.46
debian/bash 5.0-4
debian/bind9-host 1:9.11.5.P4 dfsg-5.1 deb10u8
debian/bsdutils 1:2.33.1-0.1
debian/bzip2 1.0.6-9.2~deb10u1
debian/ca-certificates 20190110
debian/coreutils 8.30-3
debian/curl 7.64.0-4 deb10u5
debian/dash 0.5.10.2-5
debian/dbus 1.12.24-0 deb10u1
debian/debconf 1.5.71
debian/debian-archive-keyring 2019.1
debian/debianutils 4.8.6.1
debian/diffutils 1:3.7-3
debian/dnsutils 1:9.11.5.P4 dfsg-5.1 deb10u8
debian/docutils-common 0.14 dfsg-4
debian/dpkg 1.19.7
debian/e2fsprogs 1.44.5-1 deb10u1
debian/fdisk 2.33.1-0.1
debian/file 1:5.35-4
debian/findutils 4.6.0 git 20190209-2
debian/fontconfig-config 2.13.1-2
debian/fontconfig 2.13.1-2
debian/fonts-dejavu-core 2.37-1
debian/fonts-droid-fallback 1:6.0.1r16-1.1
debian/fonts-noto-mono 20181227-1
debian/gcc-8-base 8.3.0-6
debian/geoip-database 20181108-1
debian/ghostscript 9.27~dfsg-2 deb10u6
debian/git-man 1:2.20.1-2
debian/git 1:2.20.1-2
debian/gpgv 2.2.12-1 deb10u1
debian/grep 3.3-1
debian/groff-base 1.22.4-3 deb10u1
debian/groff 1.22.4-3 deb10u1
debian/gsfonts 1:8.11 urwcyr1.0.7~pre44-4.4
debian/gzip 1.9-3
debian/hicolor-icon-theme 0.17-2
debian/hostname 3.21
debian/imagemagick-6-common 8:6.9.10.23 dfsg-2.1 deb10u4
debian/imagemagick-6.q16 8:6.9.10.23 dfsg-2.1 deb10u4
debian/imagemagick 8:6.9.10.23 dfsg-2.1 deb10u4
debian/init-system-helpers 1.56 nmu1
debian/iputils-ping 3:20180629-2 deb10u2
debian/jdk-17 17.0.6-ga
debian/krb5-locales 1.17-3
debian/less 487-0.1 b1
debian/libacl1 2.2.53-4
debian/libapparmor1 2.13.2-10
debian/libapr1 1.6.5-1 b1
debian/libaprutil1 1.6.1-4
debian/libapt-pkg5.0 1.8.2
debian/libasound2-data 1.1.8-1
debian/libasound2 1.1.8-1
debian/libattr1 1:2.4.48-4
debian/libaudit-common 1:2.8.4-3
debian/libaudit1 1:2.8.4-3
debian/libavahi-client3 0.7-4 deb10u1
debian/libavahi-common-data 0.7-4 deb10u1
debian/libavahi-common3 0.7-4 deb10u1
debian/libbind9-161 1:9.11.5.P4 dfsg-5.1 deb10u8
debian/libblkid1 2.33.1-0.1
debian/libbsd0 0.9.1-2
debian/libbz2-1.0 1.0.6-9.2~deb10u1
debian/libc-bin 2.28-10
debian/libc6-i386 2.28-10 deb10u2
debian/libc6-x32 2.28-10 deb10u2
debian/libc6 2.28-10 deb10u2
debian/libcairo2 1.16.0-4 deb10u1
debian/libcap-ng0 0.7.9-2
debian/libcap2-bin 1:2.25-2
debian/libcap2 1:2.25-2
debian/libcom-err2 1.44.5-1 deb10u1
debian/libcups2 2.2.10-6 deb10u6
debian/libcupsfilters1 1.21.6-5
debian/libcupsimage2 2.2.10-6 deb10u6
debian/libcurl3-gnutls 7.64.0-4
debian/libcurl4 7.64.0-4 deb10u5
debian/libdatrie1 0.2.12-2
debian/libdb5.3 5.3.28 dfsg1-0.5
debian/libdbus-1-3 1.12.24-0 deb10u1
debian/libde265-0 1.0.11-0 deb10u4
debian/libdebconfclient0 0.249
debian/libdjvulibre-text 3.5.27.1-10 deb10u1
debian/libdjvulibre21 3.5.27.1-10 deb10u1
debian/libdns1104 1:9.11.5.P4 dfsg-5.1 deb10u8
debian/libedit2 3.1-20181209-1
debian/liberror-perl 0.17027-2
debian/libexpat1 2.2.6-2 deb10u1
debian/libext2fs2 1.44.5-1 deb10u1
debian/libfdisk1 2.33.1-0.1
debian/libffi6 3.2.1-9
debian/libfftw3-double3 3.3.8-2
debian/libfontconfig1 2.13.1-2
debian/libfreetype6 2.9.1-3 deb10u3
debian/libfribidi0 1.0.5-3.1 deb10u2
debian/libfstrm0 0.4.0-1
debian/libgcc1 1:8.3.0-6
debian/libgcrypt20 1.8.4-5
debian/libgdbm-compat4 1.18.1-4
debian/libgdbm6 1.18.1-4
debian/libgeoip1 1.6.12-1
debian/libglib2.0-0 2.58.3-2 deb10u1
debian/libglib2.0-data 2.58.3-2 deb10u1
debian/libgmp10 2:6.1.2 dfsg-4
debian/libgnutls30 3.6.7-4
debian/libgomp1 8.3.0-6
debian/libgpg-error0 1.35-1
debian/libgpm2 1.20.7-5
debian/libgraphite2-3 1.3.13-7
debian/libgs9-common 9.27~dfsg-2 deb10u6
debian/libgs9 9.27~dfsg-2 deb10u6
debian/libgssapi-krb5-2 1.17-3
debian/libharfbuzz0b 2.3.1-1
debian/libheif1 1.3.2-2~deb10u1
debian/libhogweed4 3.4.1-1
debian/libice6 2:1.0.9-2
debian/libicu63 63.1-6
debian/libidn11 1.33-2.2
debian/libidn2-0 2.0.5-1
debian/libijs-0.35 0.35-14
debian/libilmbase23 2.2.1-2
debian/libimagequant0 2.12.2-1.1
debian/libirs161 1:9.11.5.P4 dfsg-5.1 deb10u8
debian/libisc1100 1:9.11.5.P4 dfsg-5.1 deb10u8
debian/libisccc161 1:9.11.5.P4 dfsg-5.1 deb10u8
debian/libisccfg163 1:9.11.5.P4 dfsg-5.1 deb10u8
debian/libjbig0 2.1-3.1 b2
debian/libjbig2dec0 0.16-1 deb10u1
debian/libjemalloc-dev 5.1.0-3
debian/libjemalloc2 5.1.0-3
debian/libjpeg62-turbo 1:1.5.2-2 deb10u1
debian/libjson-c3 0.12.1 ds-2 deb10u1
debian/libjxr-tools 1.1-6 b1
debian/libjxr0 1.1-6 b1
debian/libk5crypto3 1.17-3
debian/libkeyutils1 1.6-6
debian/libkrb5-3 1.17-3
debian/libkrb5support0 1.17-3
debian/liblcms2-2 2.9-3
debian/libldap-2.4-2 2.4.47 dfsg-3 deb10u1
debian/libldap-common 2.4.47 dfsg-3 deb10u1
debian/liblmdb0 0.9.22-1
debian/liblqr-1-0 0.4.2-2.1
debian/libltdl7 2.4.6-9
debian/liblwres161 1:9.11.5.P4 dfsg-5.1 deb10u8
debian/liblz4-1 1.8.3-1
debian/liblzma5 5.2.4-1
debian/libmagic-mgc 1:5.35-4
debian/libmagic1 1:5.35-4
debian/libmagickcore-6.q16-6-extra 8:6.9.10.23 dfsg-2.1 deb10u4
debian/libmagickcore-6.q16-6 8:6.9.10.23 dfsg-2.1 deb10u4
debian/libmagickwand-6.q16-6 8:6.9.10.23 dfsg-2.1 deb10u4
debian/libmount1 2.33.1-0.1
debian/libmpdec2 2.4.2-2
debian/libncurses6 6.1 20181013-2 deb10u3
debian/libncursesw6 6.1 20181013-2 deb10u3
debian/libnetpbm10 2:10.0-15.3 b2
debian/libnettle6 3.4.1-1
debian/libnghttp2-14 1.36.0-2 deb10u1
debian/libnuma1 2.0.12-1
debian/libopenexr23 2.2.1-4.1 deb10u2
debian/libopenjp2-7 2.3.0-2 deb10u2
debian/libp11-kit0 0.23.15-2
debian/libpam-cap 1:2.25-2
debian/libpam-modules-bin 1.3.1-5
debian/libpam-modules 1.3.1-5
debian/libpam-runtime 1.3.1-5
debian/libpam0g 1.3.1-5
debian/libpango-1.0-0 1.42.4-8~deb10u1
debian/libpangocairo-1.0-0 1.42.4-8~deb10u1
debian/libpangoft2-1.0-0 1.42.4-8~deb10u1
debian/libpaper-utils 1.1.28
debian/libpaper1 1.1.28
debian/libpcre2-8-0 10.32-5
debian/libpcre3 2:8.39-12
debian/libperl5.28 5.28.1-6
debian/libpixman-1-0 0.36.0-1 deb10u1
debian/libpng16-16 1.6.36-6
debian/libprocps7 2:3.3.15-2
debian/libprotobuf-c1 1.3.1-1 b1
debian/libpsl5 0.20.2-2
debian/libpython-stdlib 2.7.16-1
debian/libpython2-stdlib 2.7.16-1
debian/libpython2.7-minimal 2.7.16-2
debian/libpython2.7-stdlib 2.7.16-2
debian/libpython3-stdlib 3.7.3-1
debian/libpython3.7-minimal 3.7.3-2 deb10u4
debian/libpython3.7-stdlib 3.7.3-2 deb10u4
debian/libreadline7 7.0-5
debian/librtmp1 2.4 20151223.gitfa8646d.1-2
debian/libsasl2-2 2.1.27 dfsg-1
debian/libsasl2-modules-db 2.1.27 dfsg-1
debian/libsasl2-modules 2.1.27 dfsg-1
debian/libseccomp2 2.3.3-4
debian/libselinux1 2.8-1 b1
debian/libsemanage-common 2.8-2
debian/libsemanage1 2.8-2
debian/libsepol1 2.8-1
debian/libserf-1-1 1.3.9-7 b10
debian/libsm6 2:1.2.3-1
debian/libsmartcols1 2.33.1-0.1
debian/libsqlite3-0 3.27.2-3
debian/libss2 1.44.5-1 deb10u1
debian/libssh2-1 1.8.0-2.1
debian/libssl1.1 1.1.1d-0 deb10u2
debian/libstdc 6 8.3.0-6
debian/libsvn1 1.10.4-1 deb10u1
debian/libsystemd0 241-7~deb10u1
debian/libtasn1-6 4.13-3
debian/libthai-data 0.1.28-2
debian/libthai0 0.1.28-2
debian/libtiff5 4.1.0 git191117-2~deb10u7
debian/libtinfo6 6.1 20181013-2 deb10u3
debian/libuchardet0 0.0.6-3
debian/libudev1 241-7~deb10u1
debian/libunistring2 0.9.10-1
debian/libutf8proc2 2.3.0-1
debian/libuuid1 2.33.1-0.1
debian/libwebp6 0.6.1-2 deb10u1
debian/libwebpdemux2 0.6.1-2 deb10u1
debian/libwebpmux3 0.6.1-2 deb10u1
debian/libwmf0.2-7 0.2.8.4-14
debian/libx11-6 2:1.6.7-1
debian/libx11-data 2:1.6.7-1
debian/libx265-165 2.9-4
debian/libxau6 1:1.0.8-1 b2
debian/libxaw7 2:1.0.13-1 b2
debian/libxcb-render0 1.13.1-2
debian/libxcb-shm0 1.13.1-2
debian/libxcb1 1.13.1-2
debian/libxdmcp6 1:1.1.2-3
debian/libxext6 2:1.3.3-1 b2
debian/libxi6 2:1.7.9-1
debian/libxml2 2.9.4 dfsg1-7 b3
debian/libxmu6 2:1.1.2-2 b3
debian/libxmuu1 2:1.1.2-2 b3
debian/libxpm4 1:3.5.12-1
debian/libxrender1 1:0.9.10-1
debian/libxt6 1:1.1.5-1 b3
debian/libxtst6 2:1.2.3-1
debian/libyaml-0-2 0.2.1-1
debian/libzstd1 1.3.8 dfsg-3
debian/login 1:4.5-1.1
debian/lsb-base 10.2019051400
debian/mawk 1.3.3-17 b3
debian/mercurial-common 4.8.2-1 deb10u1
debian/mercurial 4.8.2-1 deb10u1
debian/mime-support 3.62
debian/mount 2.33.1-0.1
debian/ncurses-base 6.1 20181013-2 deb10u1
debian/ncurses-bin 6.1 20181013-2 deb10u1
debian/net-tools 1.60 git20180626.aebd88e-1
debian/netbase 5.6
debian/netpbm 2:10.0-15.3 b2
debian/openssh-client 1:7.9p1-10 deb10u1
debian/openssl 1.1.1d-0 deb10u2
debian/passwd 1:4.5-1.1
debian/patch 2.7.6-3 deb10u1
debian/perl-base 5.28.1-6
debian/perl-modules-5.28 5.28.1-6
debian/perl 5.28.1-6
debian/poppler-data 0.4.9-2
debian/procps 2:3.3.15-2
debian/psmisc 23.2-1 deb10u1
debian/psutils 1.17.dfsg-4
debian/publicsuffix 20190415.1030-1
debian/python-minimal 2.7.16-1
debian/python2-minimal 2.7.16-1
debian/python2.7-minimal 2.7.16-2
debian/python2.7 2.7.16-2
debian/python2 2.7.16-1
debian/python3-botocore 1.12.103 repack-1
debian/python3-certifi 2018.8.24-1
debian/python3-chardet 3.0.4-3
debian/python3-colorama 0.3.7-1
debian/python3-dateutil 2.7.3-3
debian/python3-docutils 0.14 dfsg-4
debian/python3-idna 2.6-1
debian/python3-jmespath 0.9.4-1
debian/python3-minimal 3.7.3-1
debian/python3-olefile 0.46-1
debian/python3-pil 5.4.1-2 deb10u3
debian/python3-pkg-resources 40.8.0-1
debian/python3-pyasn1 0.4.2-3
debian/python3-pygments 2.3.1 dfsg-1 deb10u2
debian/python3-requests 2.21.0-1
debian/python3-roman 2.0.0-3
debian/python3-rsa 4.0-2
debian/python3-s3transfer 0.2.0-1
debian/python3-six 1.12.0-1
debian/python3-urllib3 1.24.1-1
debian/python3-yaml 3.13-2
debian/python3.7-minimal 3.7.3-2 deb10u4
debian/python3.7 3.7.3-2 deb10u4
debian/python3 3.7.3-1
debian/python 2.7.16-1
debian/readline-common 7.0-5
debian/sed 4.7-1
debian/sensible-utils 0.0.12
debian/sgml-base 1.29
debian/shared-mime-info 1.10-1
debian/subversion 1.10.4-1 deb10u1
debian/sysvinit-utils 2.93-8
debian/tar 1.30 dfsg-6
debian/tzdata 2019b-0 deb10u1
debian/ucf 3.0038 nmu1
debian/unzip 6.0-23 deb10u3
debian/util-linux 2.33.1-0.1
debian/vim-common 2:8.1.0875-5 deb10u4
debian/vim-runtime 2:8.1.0875-5 deb10u4
debian/vim 2:8.1.0875-5 deb10u4
debian/wget 1.20.1-1.1
debian/x11-common 1:7.7 19
debian/xauth 1:1.0.10-1
debian/xdg-user-dirs 0.17-2
debian/xml-core 0.18 nmu1
debian/xxd 2:8.1.0875-5 deb10u4
debian/xz-utils 5.2.4-1
debian/zip 3.0-11 b1
debian/zlib1g 1:1.2.11.dfsg-1

java 11.0.1 13-LTS
python 2.7.5
python 3.7.4
python 3.7.8

aopalliance:aopalliance 1.0
arpack_combined_all:arpack_combined_all 0.1
bsh:bsh 2.0b6
ch.qos.logback:logback-classic 1.2.11
ch.qos.logback:logback-core 1.2.11
ch.qos.reload4j:reload4j 1.2.22
cisd-jhdf5:cisd-jhdf5 *
cmdoption:cmdoption 0.7.1-4-1b53a5
colt:colt 1.2.0
com.amazonaws:aws-java-sdk-core 1.12.246
com.amazonaws:aws-java-sdk-core 1.12.365
com.amazonaws:aws-java-sdk-kms 1.12.246
com.amazonaws:aws-java-sdk-kms 1.12.365
com.amazonaws:aws-java-sdk-s3 1.12.246
com.amazonaws:aws-java-sdk-s3 1.12.365
com.amazonaws:aws-java-sdk-sts 1.12.365
com.amazonaws:jmespath-java 1.12.246
com.amazonaws:jmespath-java 1.12.365
com.esotericsoftware.kryo:kryo 2.24.0
com.esotericsoftware.minlog:minlog 1.2
com.esotericsoftware.reflectasm:reflectasm 1.09
com.fasterxml.jackson.core:jackson-annotations 2.13.2
com.fasterxml.jackson.core:jackson-annotations 2.13.3
com.fasterxml.jackson.core:jackson-annotations 2.14.1
com.fasterxml.jackson.core:jackson-core 2.13.2
com.fasterxml.jackson.core:jackson-core 2.13.3
com.fasterxml.jackson.core:jackson-core 2.14.1
com.fasterxml.jackson.core:jackson-databind 2.13.2.2
com.fasterxml.jackson.core:jackson-databind 2.13.3
com.fasterxml.jackson.core:jackson-databind 2.14.1
com.fasterxml.jackson.dataformat:jackson-dataformat-cbor 2.13.3
com.fasterxml.jackson.jaxrs:jackson-jaxrs-base 2.13.3
com.fasterxml.jackson.jaxrs:jackson-jaxrs-json-provider 2.13.3
com.fasterxml.jackson.module:jackson-module-jaxb-annotations 2.13.3
com.fasterxml.woodstox:woodstox-core 5.3.0
com.github.javaparser:javaparser-core 3.17.0
com.github.luben:zstd-jni 1.5.2-3
com.github.stephenc.jcip:jcip-annotations 1.0-1
com.github.wendykierp:JTransforms 3.1
com.google.api-client:google-api-client 1.34.0
com.google.api-client:google-api-client 1.34.1
com.google.api.apicommon:api-common 2.2.0
com.google.api.grpc:proto-google-common-protos 2.8.3
com.google.api.grpc:proto-google-iam-v1 1.3.4
com.google.api.services.storage:google-api-services-storage-v1-rev20220608 1.32.1
com.google.api.services.storage:google-api-services-storage-v1-rev20220705 1.32.1
com.google.apis:google-api-services-storage v1-rev20220608-1.32.1
com.google.apis:google-api-services-storage v1-rev20220705-1.32.1
com.google.auth:google-auth-library-credentials 1.7.0
com.google.auth:google-auth-library-oauth2-http 1.7.0
com.google.auto.service:auto-service-annotations 1.0.1
com.google.auto.service:auto-service 1.0.1
com.google.auto.value:auto-value-annotations 1.9
com.google.auto:auto-common 1.2
com.google.cloud:google-cloud-core-http 2.7.1
com.google.cloud:google-cloud-core 2.7.1
com.google.cloud:google-cloud-storage 2.8.1
com.google.code.findbugs:jsr305 3.0.2
com.google.code.gson:gson 2.8.9
com.google.code.gson:gson 2.9.0
com.google.errorprone:error_prone_annotations 2.11.0
com.google.errorprone:error_prone_annotations 2.5.1
com.google.guava:failureaccess 1.0.1
com.google.guava:guava 30.1.1-jre
com.google.guava:guava 31.1-jre
com.google.guava:listenablefuture 1.0
com.google.guava:listenablefuture 9999.0-empty-to-avoid-conflict-with-guava
com.google.http-client:google-http-client-apache-v2 1.41.8
com.google.http-client:google-http-client-apache-v2 1.42.2
com.google.http-client:google-http-client-appengine 1.41.8
com.google.http-client:google-http-client-gson 1.41.8
com.google.http-client:google-http-client-gson 1.42.2
com.google.http-client:google-http-client-jackson2 1.41.8
com.google.http-client:google-http-client 1.42.0
com.google.http-client:google-http-client 1.42.2
com.google.inject.servlet:guice-servlet 4.0
com.google.inject:guice 4.0
com.google.j2objc:j2objc-annotations 1.3
com.google.oauth-client:google-oauth-client 1.33.3
com.google.oauth-client:google-oauth-client 1.34.1
com.google.protobuf:protobuf-java-util 3.20.1
com.google.protobuf:protobuf-java 3.20.1
com.google.protobuf:protobuf-java 3.7.1
com.google.re2j:re2j 1.1
com.googlecode.jatl:jatl 0.2.3
com.googlecode.json-simple:json-simple 1.1.1
com.googlecode.plist:dd-plist 1.21
com.ibm.icu:icu4j 69.1
com.jcraft:jsch 0.1.55
com.jcraft:jzlib 1.1.3
com.microsoft.azure:azure-keyvault-core 1.2.4
com.microsoft.azure:azure-storage 8.6.6
com.nimbusds:nimbus-jose-jwt 9.8.1
com.squareup.okhttp3:okhttp 4.9.3
com.sun.activation:jakarta.activation 2.0.0
com.sun.istack:istack-commons-runtime 4.0.0
com.sun.jersey.contribs:jersey-guice 1.19
com.sun.jersey:jersey-client 1.19
com.sun.jersey:jersey-core 1.19
com.sun.jersey:jersey-json 1.19
com.sun.jersey:jersey-server 1.19
com.sun.jersey:jersey-servlet 1.19
com.sun.jna:jna 5.10.0
com.sun.jna:jna 5.9.0
com.sun.xml.bind:jaxb-core 3.0.0
com.sun.xml.bind:jaxb-impl 3.0.0
com.sun:jaxb-impl 2.2.3-1
com.thoughtworks.paranamer:paranamer 2.3
com.thoughtworks.qdox:qdox 1.12.1
com.zaxxer:HikariCP 5.0.1
commons-beanutils:commons-beanutils 1.9.4
commons-cli:commons-cli 1.2
commons-codec:commons-codec 1.15
commons-collections:commons-collections 3.2.2
commons-configuration:commons-configuration 1.10
commons-io:commons-io 1.4
commons-io:commons-io 2.11.0
commons-lang:commons-lang 2.4
commons-lang:commons-lang 2.6
commons-net:commons-net 3.6
commons-pool:commons-pool 1.6
concurrent:concurrent 1.3.4
converter-jackson:converter-jackson 2.9.0
dev.ludovic.netlib:arpack 3.0.1
dev.ludovic.netlib:blas 3.0.1
dev.ludovic.netlib:lapack 3.0.1
dnsjava:dnsjava 2.1.7
fastutil:fastutil 8.5.2-min
file-events-linux-aarch64:file-events-linux-aarch64 0.22-milestone-24
file-events-linux-amd64:file-events-linux-amd64 0.22-milestone-24
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native-platform-osx-aarch64:native-platform-osx-aarch64 0.22-milestone-24
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native-platform-windows-amd64-min:native-platform-windows-amd64-min 0.22-milestone-24
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native-platform-windows-i386-min:native-platform-windows-i386-min 0.22-milestone-24
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native-platform:native-platform 0.22-milestone-24
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net.minidev:accessors-smart 2.4.7
net.minidev:json-smart 1.3.2
net.minidev:json-smart 2.4.7
net.openhft:zero-allocation-hashing 0.9
net.sf.opencsv:opencsv 2.3
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okio-jvm:okio-jvm 2.8.0
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opencensus-contrib-http-util:opencensus-contrib-http-util 0.31.1
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tomlj:tomlj 1.0.0
trove4j:trove4j 1.0.20200330

jquery-ui 1.12.1