Ecosyste.ms: Docker
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jesusgf23/allenseurat : latest
Latest release: almost 2 years ago - 370 downloads - 933 dependencies
JSONDependencies
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.60.2
- BH 1.81.0-1
- Biobase 2.58.0
- BiocGenerics 0.44.0
- BiocIO 1.8.0
- BiocManager 1.30.20
- BiocParallel 1.32.6
- BiocVersion 3.16.0
- Biostrings 2.66.0
- DBI 1.1.3
- DDRTree 0.1.5
- DESeq2 1.38.3
- DEoptimR 1.0-12
- DelayedArray 0.24.0
- DelayedMatrixStats 1.20.0
- FNN 1.1.3.2
- GenomeInfoDb 1.34.9
- GenomeInfoDbData 1.2.9
- GenomicRanges 1.50.2
- HDF5Array 1.26.0
- HSMMSingleCell 1.18.0
- IRanges 2.32.0
- KEGGREST 1.38.0
- KernSmooth 2.23-20
- MASS 7.3-56
- MAST 1.24.1
- Matrix 1.4-1
- Matrix 1.5-4
- MatrixGenerics 1.10.0
- MatrixModels 0.5-1
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RANN 2.6.1
- RBGL 1.74.0
- RColorBrewer 1.1-3
- RCurl 1.98-1.12
- ROCR 1.0-11
- RSQLite 2.3.1
- RUnit 0.4.32
- Rcpp 1.0.10
- RcppAnnoy 0.0.20
- RcppArmadillo 0.12.2.0.0
- RcppEigen 0.3.3.9.3
- RcppGSL 0.3.13
- RcppGSLExample 0.0.3
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppTOML 0.2.2
- RcppZiggurat 0.1.6
- Rdpack 2.4
- RdpackTester 1.0
- Rfast2 0.1.4
- Rfast 2.0.7
- Rhdf5lib 1.20.0
- Rtsne 0.16
- S4Vectors 0.36.2
- Seurat 4.3.0
- SeuratData 0.2.2
- SeuratDisk 0.0.0.9020
- SeuratObject 4.1.3
- SingleCellExperiment 1.20.1
- SparseM 1.81
- SummarizedExperiment 1.28.0
- TFisher 0.2.0
- TH.data 1.1-2
- VGAM 1.1-8
- WriteXLS 6.4.0
- XML 3.99-0.14
- XVector 0.38.0
- abind 1.4-5
- annotate 1.76.0
- ape 5.7-1
- askpass 1.1
- base64enc 0.1-3
- base 4.2.0
- beachmat 2.14.2
- beachtest 1.0.0
- biocViews 1.66.3
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.4
- boot 1.3-28
- bslib 0.4.2
- caTools 1.18.2
- cachem 1.0.7
- class 7.3-20
- cli 3.6.1
- cluster 2.1.3
- codetools 0.2-18
- colorspace 2.1-0
- combinat 0.0-8
- commonmark 1.9.0
- compiler 4.2.0
- cowplot 1.1.1
- cpp11 0.4.3
- crayon 1.5.2
- crosstalk 1.2.0
- curl 5.0.0
- data.table 1.14.8
- datasets 4.2.0
- deldir 1.0-6
- digest 0.6.31
- docopt 0.7.1
- dplyr 1.1.2
- dqrng 0.3.0
- ellipsis 0.3.2
- enrichR 3.2
- evaluate 0.20
- fansi 1.0.4
- farver 2.1.1
- fastICA 1.2-3
- fastmap 1.1.1
- fitdistrplus 1.1-8
- fontawesome 0.5.1
- foreign 0.8-82
- formatR 1.14
- fs 1.6.1
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.10.0
- future 1.32.0
- geneplotter 1.76.0
- generics 0.1.3
- ggplot2 3.4.2
- ggrepel 0.9.3
- ggridges 0.5.4
- glmGamPoi 1.10.2
- globals 0.16.2
- glue 1.6.2
- goftest 1.2-3
- gplots 3.1.3
- grDevices 4.2.0
- graph 1.76.0
- graphics 4.2.0
- grid 4.2.0
- gridExtra 2.3
- gtable 0.3.3
- gtools 3.9.4
- hdf5r 1.3.8
- here 1.0.1
- highr 0.10
- hms 1.1.3
- htmltools 0.5.5
- htmlwidgets 1.6.2
- httpuv 1.6.9
- httr 1.4.5
- ica 1.0-3
- igraph 1.4.2
- irlba 2.3.5.1
- isoband 0.2.7
- jquerylib 0.1.4
- jsonlite 1.8.4
- kernlab 0.9-32
- knitr 1.42
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.0
- lattice 0.20-45
- lazyeval 0.2.2
- leiden 0.4.3
- leidenbase 0.1.18
- lifecycle 1.0.3
- limma 3.54.2
- listenv 0.9.0
- littler 0.3.15
- lmtest 0.9-40
- locfit 1.5-9.7
- magrittr 2.0.3
- mathjaxr 1.6-0
- matrixStats 0.63.0
- memoise 2.0.1
- metap 1.8
- methods 4.2.0
- mgcv 1.8-40
- mime 0.12
- miniUI 0.1.1.1
- mixtools 2.0.0
- mnormt 2.1.1
- monocle 2.26.0
- morebeach 1.0.0
- morebeachtests 1.0.0
- multcomp 1.4-23
- multtest 2.54.0
- munsell 0.5.0
- mutoss 0.1-13
- mvtnorm 1.1-3
- mvtnormAPI 1.0-0
- nlme 3.1-157
- nnet 7.3-17
- numDeriv 2016.8-1.1
- openssl 2.0.6
- org.testing.db 0.1
- parallel 4.2.0
- parallelly 1.35.0
- patchwork 1.1.2
- pbapply 1.7-0
- pheatmap 1.0.12
- pillar 1.9.0
- pkgconfig 2.0.3
- plogr 0.2.0
- plotly 4.10.1
- plotrix 3.8-2
- plyr 1.8.8
- png 0.1-8
- polyclip 1.10-4
- prettyunits 1.1.1
- progress 1.2.2
- progressr 0.13.0
- promises 1.2.0.1
- proxy 0.4-27
- purrr 1.0.1
- qlcMatrix 0.9.7
- qqconf 1.3.2
- quantreg 5.95
- rappdirs 0.3.3
- rbibutils 2.2.13
- remotes 2.4.2
- reshape2 1.4.4
- restfulr 0.0.15
- reticulate 1.28
- rgeos 0.6-2
- rhdf5 2.42.1
- rhdf5filters 1.10.1
- rjson 0.2.21
- rlang 1.1.0
- rmarkdown 2.21
- robustbase 0.95-1
- rpart 4.1.16
- rprojroot 2.0.3
- sandwich 3.0-2
- sass 0.4.5
- scales 1.2.1
- scattermore 0.8
- sctransform 0.3.5
- segmented 1.6-4
- shiny 1.7.4
- sitmo 2.0.2
- slam 0.1-50
- sn 2.1.1
- snow 0.4-4
- sourcetools 0.1.7-1
- sp 1.6-0
- sparseMatrixStats 1.10.0
- sparsesvd 0.2-2
- spatial 7.3-15
- spatstat.data 3.0-1
- spatstat.explore 3.1-0
- spatstat.geom 3.1-0
- spatstat.random 3.1-4
- spatstat.sparse 3.0-1
- spatstat.utils 3.0-2
- splines 4.2.0
- stats4 4.2.0
- stats 4.2.0
- stringi 1.7.12
- stringr 1.5.0
- survival 3.3-1
- sys 3.4.1
- tcltk 4.2.0
- tensor 1.5
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- tibble 3.2.1
- tidyr 1.3.0
- tidyselect 1.2.0
- tinytex 0.45
- tools 4.2.0
- translations 4.2.0
- utf8 1.2.3
- utils 4.2.0
- uwot 0.1.14
- vctrs 0.6.2
- viridis 0.6.2
- viridisLite 0.4.1
- withr 2.5.0
- xfun 0.39
- xtable 1.8-4
- yaml 2.3.7
- zlibbioc 1.44.0
- zoo 1.8-12
- ubuntu/adduser 3.118ubuntu2
- ubuntu/adwaita-icon-theme 3.36.1-2ubuntu0.20.04.2
- ubuntu/alsa-topology-conf 1.2.2-1
- ubuntu/alsa-ucm-conf 1.2.2-1ubuntu0.13
- ubuntu/apt 2.0.9
- ubuntu/at-spi2-core 2.36.0-2
- ubuntu/autoconf 2.69-11.1
- ubuntu/automake 1:1.16.1-4ubuntu6
- ubuntu/autotools-dev 20180224.1
- ubuntu/base-files 11ubuntu5.7
- ubuntu/base-passwd 3.5.47
- ubuntu/bash-completion 1:2.10-1ubuntu1
- ubuntu/bash 5.0-6ubuntu1.2
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