jafoltz/scclassify : latest

Latest release: over 3 years ago - 145 downloads - 1,079 dependencies

Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.56.2
BH 1.78.0-0
Biobase 2.54.0
BiocGenerics 0.40.0
BiocIO 1.4.0
BiocManager 1.30.16
BiocNeighbors 1.12.0
BiocParallel 1.28.3
BiocSingular 1.10.0
BiocVersion 3.14.0
Biostrings 2.62.0
Capybara 0.0.0.9000
DBI 1.1.3
DDRTree 0.1.5
DESeq2 1.34.0
DEoptimR 1.0-10
DelayedArray 0.20.0
DelayedMatrixStats 1.16.0
FNN 1.1.3
Formula 1.2-4
GO.db 3.14.0
GenomeInfoDb 1.30.1
GenomeInfoDbData 1.2.7
GenomicRanges 1.46.1
HDF5Array 1.22.1
HSAUR2 1.1-19
HSMMSingleCell 1.14.0
Hmisc 4.7-2
IRanges 2.28.0
KEGGREST 1.34.0
KernSmooth 2.23-20
MASS 7.3-54
MAST 1.20.0
MVA 1.0-8
Matrix 1.3-3
MatrixGenerics 1.6.0
MatrixModels 0.5-0
R.methodsS3 1.8.1
R.oo 1.24.0
R.utils 2.11.0
R6 2.5.1
RANN 2.6.1
RBGL 1.70.0
RColorBrewer 1.1-3
RCurl 1.98-1.6
ROCR 1.0-11
RSQLite 2.2.10
RSpectra 0.16-0
RUnit 0.4.32
Rcpp 1.0.9
RcppAnnoy 0.0.19
RcppArmadillo 0.10.8.1.0
RcppEigen 0.3.3.9.3
RcppGSL 0.3.10
RcppGSLExample 0.0.3
RcppHNSW 0.4.1
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppTOML 0.1.7
RcppZiggurat 0.1.6
Rdpack 2.1.4
RdpackTester 1.0
Rfast2 0.1.1
Rfast 2.0.6
Rhdf5lib 1.16.0
Rtsne 0.15
S4Vectors 0.32.3
ScaledMatrix 1.2.0
Seurat 4.1.0
SeuratDisk 0.0.0.9019
SeuratObject 4.0.4
SingleCellExperiment 1.16.0
SingleR 1.8.1
SparseM 1.81
SummarizedExperiment 1.24.0
TFisher 0.2.0
TH.data 1.1-0
VGAM 1.1-6
WGCNA 1.71
XML 3.99-0.9
XVector 0.34.0
abind 1.4-5
annotate 1.72.0
ape 5.6-2
askpass 1.1
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.1.0
beachmat 2.10.0
beachtest 1.0.0
biocViews 1.62.1
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blob 1.2.3
bluster 1.4.0
boot 1.3-28
brew 1.0-8
brio 1.1.3
broom 1.0.1
bslib 0.4.1
caTools 1.18.2
cachem 1.0.6
callr 3.7.3
cellranger 1.1.0
checkmate 2.1.0
class 7.3-19
cli 3.4.1
clipr 0.8.0
cluster 2.1.2
codetools 0.2-18
colorspace 2.0-3
combinat 0.0-8
commonmark 1.8.0
compiler 4.1.0
cowplot 1.1.1
cpp11 0.4.3
crayon 1.5.2
credentials 1.3.2
crosstalk 1.2.0
curl 4.3.3
data.table 1.14.6
datasets 4.1.0
dbplyr 2.2.1
deldir 1.0-6
densityClust 0.3.2
desc 1.4.2
devtools 2.4.5
diffobj 0.3.5
digest 0.6.30
distr 2.8.0
doParallel 1.0.17
docopt 0.7.1
downlit 0.4.2
dplyr 1.0.10
dqrng 0.3.0
dsb 1.0.1
dtplyr 1.2.2
dynamicTreeCut 1.63-1
edgeR 3.36.0
ellipsis 0.3.2
enrichR 3.0
evaluate 0.18
fansi 1.0.3
farver 2.1.1
fastICA 1.2-3
fastcluster 1.2.3
fastmap 1.1.0
fitdistrplus 1.1-8
fontawesome 0.2.2
forcats 0.5.2
foreach 1.5.2
foreign 0.8-81
formatR 1.11
fs 1.5.2
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.8.1
future 1.24.0
gargle 1.2.1
genefilter 1.76.0
geneplotter 1.72.0
generics 0.1.3
gert 1.9.1
ggplot2 3.4.0
ggrepel 0.9.1
ggridges 0.5.3
gh 1.3.1
gitcreds 0.1.2
glmGamPoi 1.6.0
glmnet 4.1-6
globals 0.14.0
glue 1.6.2
goftest 1.2-3
googledrive 2.0.0
googlesheets4 1.0.1
gplots 3.1.1
grDevices 4.1.0
graph 1.72.0
graphics 4.1.0
grid 4.1.0
gridExtra 2.3
gtable 0.3.1
gtools 3.9.2
haven 2.5.1
hdf5r 1.3.5
here 1.0.1
highr 0.9
hms 1.1.2
htmlTable 2.4.1
htmltools 0.5.3
htmlwidgets 1.5.4
httpuv 1.6.5
httr 1.4.4
ica 1.0-2
ids 1.0.1
igraph 1.2.11
impute 1.68.0
ini 0.3.1
interp 1.1-3
irlba 2.3.5
isoband 0.2.6
iterators 1.0.14
jpeg 0.1-10
jquerylib 0.1.4
jsonlite 1.8.3
kernlab 0.9-29
knitr 1.41
labeling 0.4.2
lambda.r 1.2.4
later 1.3.0
lattice 0.20-44
latticeExtra 0.6-30
lazyeval 0.2.2
leiden 0.3.9
lifecycle 1.0.3
limma 3.50.3
listenv 0.8.0
littler 0.3.12
lmtest 0.9-39
locfit 1.5-9.5
lubridate 1.9.0
magrittr 2.0.3
mathjaxr 1.6-0
matrixStats 0.63.0
mclust 5.4.9
memoise 2.0.1
metapod 1.2.0
methods 4.1.0
mgcv 1.8-35
mime 0.12
miniUI 0.1.1.1
mixtools 1.2.0
mnormt 2.1.1
modelr 0.1.10
monocle 2.22.0
morebeach 1.0.0
morebeachtests 1.0.0
multcomp 1.4-18
multtest 2.50.0
munsell 0.5.0
mutoss 0.1-12
mvtnorm 1.1-3
mvtnormAPI 1.0-0
nlme 3.1-152
nnet 7.3-16
numDeriv 2016.8-1.1
openssl 2.0.4
org.testing.db 0.1
parallel 4.1.0
parallelly 1.30.0
patchwork 1.1.1
pbapply 1.5-0
pbmcapply 1.5.1
pheatmap 1.0.12
pillar 1.8.1
pkgbuild 1.4.0
pkgconfig 2.0.3
pkgdown 2.0.6
pkgload 1.3.2
plogr 0.2.0
plotly 4.10.0
plotrix 3.8-2
plyr 1.8.8
png 0.1-8
polyclip 1.10-0
praise 1.0.0
preprocessCore 1.56.0
prettyunits 1.1.1
processx 3.8.0
profvis 0.3.7
progress 1.2.2
promises 1.2.0.1
proxy 0.4-26
ps 1.7.2
psych 2.2.9
purrr 0.3.5
qlcMatrix 0.9.7
quadprog 1.5-8
quantreg 5.88
ragg 1.2.4
rappdirs 0.3.3
rbibutils 2.2.7
rcmdcheck 1.4.0
readr 2.1.3
readxl 1.4.1
rematch2 2.1.2
rematch 1.0.1
remotes 2.4.2
reprex 2.0.2
reshape2 1.4.4
reshape 0.8.9
restfulr 0.0.13
reticulate 1.24
rhdf5 2.38.0
rhdf5filters 1.6.0
rjson 0.2.21
rlang 1.0.6
rmarkdown 2.18
robustbase 0.93-9
roxygen2 7.2.2
rpart 4.1-15
rprojroot 2.0.2
rstudioapi 0.14
rsvd 1.0.5
rversions 2.1.2
rvest 1.0.3
sandwich 3.0-1
sass 0.4.4
scales 1.2.1
scattermore 0.8
scran 1.22.1
sctransform 0.3.3
scuttle 1.4.0
segmented 1.4-0
selectr 0.4-2
sessioninfo 1.2.2
sfsmisc 1.1-12
shape 1.4.6
shiny 1.7.1
sitmo 2.0.2
slam 0.1-50
sn 2.0.2
snow 0.4-4
sourcetools 0.1.7
sparseMatrixStats 1.6.0
sparsesvd 0.2
spatial 7.3-14
spatstat.core 2.4-0
spatstat.data 2.1-2
spatstat.geom 2.3-2
spatstat.random 2.1-0
spatstat.sparse 2.1-0
spatstat.utils 2.3-0
splines 4.1.0
startupmsg 0.9.6
statmod 1.4.37
stats4 4.1.0
stats 4.1.0
stringi 1.7.8
stringr 1.4.1
survival 3.2-11
sys 3.4.1
systemfonts 1.0.4
tcltk 4.1.0
tensor 1.5
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.5
textshaping 0.3.6
tibble 3.1.8
tidyr 1.2.1
tidyselect 1.2.0
tidyverse 1.3.2
timechange 0.1.1
tinytex 0.42
tmvnsim 1.0-2
tools 4.1.0
translations 4.1.0
tzdb 0.3.0
urlchecker 1.0.1
usethis 2.1.6
utf8 1.2.2
utils 4.1.0
uuid 1.1-0
uwot 0.1.11
vctrs 0.5.1
viridis 0.6.2
viridisLite 0.4.1
vroom 1.6.0
waldo 0.4.0
whisker 0.4
withr 2.5.0
xfun 0.35
xml2 1.3.3
xopen 1.0.0
xtable 1.8-4
yaml 2.3.6
zip 2.2.2
zlibbioc 1.40.0
zoo 1.8-9

PyYAML 5.3.1
Pygments 2.3.1
joblib 1.1.0
llvmlite 0.38.0
mypy 0.902
numba 0.55.1
numpy 1.22.3
pip 20.0.2
pynndescent 0.5.6
scikit-learn 1.0.2
scipy 1.8.0
setuptools 45.2.0
threadpoolctl 3.1.0
tqdm 4.63.0
umap-learn 0.5.2
wheel 0.34.2

bash 5.0.17

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jafoltz/scclassify : latest

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