gru4/scan2fixedhg38 : latest

Latest release: about 3 years ago - 95 downloads - 777 dependencies

Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
BH 1.81.0-1
BSgenome.Hsapiens.1000genomes.hs37d5 0.99.1
BSgenome.Hsapiens.UCSC.hg38 1.4.4
BSgenome 1.62.0
Biobase 2.54.0
BiocGenerics 0.40.0
BiocIO 1.4.0
BiocParallel 1.28.3
Biostrings 2.62.0
DelayedArray 0.20.0
GenomeInfoDb 1.30.1
GenomeInfoDbData 1.2.7
GenomicAlignments 1.30.0
GenomicRanges 1.46.1
IRanges 2.28.0
KernSmooth 2.23-21
MASS 7.3-58.3
Matrix 1.5-4.1
MatrixGenerics 1.6.0
R.methodsS3 1.8.2
R.oo 1.25.0
R.utils 2.12.2
R6 2.5.1
RApiSerialize 0.1.2
RColorBrewer 1.1-3
RCurl 1.98-1.12
Rcpp 1.0.10
RcppParallel 5.1.6
RcppTOML 0.2.2
RhpcBLASctl 0.23-42
Rhtslib 1.26.0
Rsamtools 2.10.0
S4Vectors 0.32.4
SigProfilerMatrixGeneratorR 0.1.0
SummarizedExperiment 1.24.0
XML 3.99-0.14
XVector 0.34.0
argparse 2.2.2
askpass 1.1
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.1.3
bedtoolsr 2.30.0-2
bitops 1.0-7
brew 1.0-8
brio 1.1.3
bslib 0.4.2
caTools 1.18.2
cachem 1.0.8
callr 3.7.3
cli 3.6.1
clipr 0.8.0
codetools 0.2-19
colorspace 2.1-0
commonmark 1.9.0
compiler 4.1.3
cpp11 0.4.3
crayon 1.5.2
credentials 1.3.2
curl 4.3.3
data.table 1.14.8
datasets 4.1.3
desc 1.4.2
devtools 2.4.5
diffobj 0.3.5
digest 0.6.31
downlit 0.4.2
ellipsis 0.3.2
evaluate 0.21
fansi 1.0.4
farver 2.1.1
fastGHQuad 1.0.1
fastmap 1.1.1
findpython 1.0.8
fontawesome 0.5.1
formatR 1.14
fs 1.6.2
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.11.0
future 1.32.0
gert 1.9.2
ggplot2 3.4.2
gh 1.4.0
gitcreds 0.1.2
globals 0.16.2
glue 1.6.2
gplots 3.1.3
grDevices 4.1.3
graphics 4.1.3
grid 4.1.3
gsalib 2.2.1
gtable 0.3.3
gtools 3.9.4
here 1.0.1
highr 0.10
htmltools 0.5.5
htmlwidgets 1.6.2
httpuv 1.6.11
httr2 0.2.3
httr 1.4.6
ini 0.3.1
isoband 0.2.7
jquerylib 0.1.4
jsonlite 1.8.5
knitr 1.43
labeling 0.4.2
lambda.r 1.2.4
later 1.3.1
lattice 0.21-8
lifecycle 1.0.3
listenv 0.9.0
magrittr 2.0.3
matrixStats 1.0.0
memoise 2.0.1
methods 4.1.3
mgcv 1.8-42
mime 0.12
miniUI 0.1.1.1
munsell 0.5.0
nlme 3.1-162
openssl 2.0.5
parallel 4.1.3
parallelly 1.36.0
pillar 1.9.0
pkgbuild 1.4.0
pkgconfig 2.0.3
pkgdown 2.0.7
pkgload 1.3.2
plyr 1.8.8
png 0.1-8
pracma 2.4.2
praise 1.0.0
prettyunits 1.1.1
processx 3.8.1
profvis 0.3.8
progressr 0.13.0
promises 1.2.0.1
ps 1.7.5
purrr 1.0.1
qs 0.25.5
ragg 1.2.4
rappdirs 0.3.3
rcmdcheck 1.4.0
rematch2 2.1.2
remotes 2.4.2
reshape 0.8.9
restfulr 0.0.15
reticulate 1.28
rjson 0.2.21
rlang 1.1.1
rmarkdown 2.22
roxygen2 7.2.3
rprojroot 2.0.3
rstudioapi 0.14
rtracklayer 1.54.0
rversions 2.1.2
sass 0.4.6
scales 1.2.1
scan2 1.0
sessioninfo 1.2.2
shiny 1.7.4
snow 0.4-4
sourcetools 0.1.7-1
splines 4.1.3
stats4 4.1.3
stats 4.1.3
stringfish 0.15.7
stringi 1.7.12
stringr 1.5.0
sys 3.4.2
systemfonts 1.0.4
tcltk 4.1.3
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.8
textshaping 0.3.6
tibble 3.2.1
tinytex 0.45
tools 4.1.3
translations 4.1.3
urlchecker 1.0.1
usethis 2.2.0
utf8 1.2.3
utils 4.1.3
vctrs 0.6.2
viridisLite 0.4.1
waldo 0.5.1
whisker 0.4.1
withr 2.5.0
xfun 0.39
xml2 1.3.3
xopen 1.0.0
xtable 1.8-4
yaml 2.3.7
zip 2.3.0
zlibbioc 1.40.0

bash 5.0.17
java 1.8.0_332-b09
python 3.8.16

ConfigArgParse 1.5.3
GitPython 3.1.31
Jinja2 3.1.2
MarkupSafe 2.1.3
Pillow 9.2.0
PuLP 2.7.0
PyNaCl 1.5.0
PyQt5-sip 12.11.0
PyQt5 5.15.7
PySocks 1.7.1
PyYAML 6.0
Pygments 2.15.1
SigProfilerMatrixGenerator 1.2.9
aioeasywebdav 2.4.0
aiohttp 3.8.4
aiosignal 1.3.1
amply 0.1.5
appdirs 1.4.4
async-timeout 4.0.2
attmap 0.13.2
attrs 23.1.0
backports.functools-lru-cache 1.6.4
bcrypt 3.2.2
boltons 23.0.0
boto3 1.26.147
botocore 1.29.147
brotlipy 0.7.0
cachetools 5.3.0
certifi 2023.5.7
cffi 1.15.1
charset-normalizer 2.0.4
colorama 0.4.6
conda-content-trust 0.1.3
conda-package-handling 2.0.2
conda 23.5.0
conda_package_streaming 0.7.0
connection-pool 0.0.3
coverage 5.5
cryptography 38.0.4
cycler 0.11.0
datrie 0.8.2
defusedxml 0.7.1
docutils 0.20.1
dpath 2.1.6
drmaa 0.7.9
dropbox 11.36.0
exceptiongroup 1.1.1
fastjsonschema 2.17.1
filechunkio 1.8
filelock 3.12.0
flask 1.1.1
frozenlist 1.3.3
ftputil 5.0.4
gitdb 4.0.10
google-api-core 2.11.0
google-api-python-client 2.88.0
google-auth-httplib2 0.1.0
google-auth 2.19.1
google-cloud-core 2.3.2
google-cloud-storage 2.9.0
google-crc32c 1.1.2
google-resumable-media 2.5.0
googleapis-common-protos 1.57.1
grpcio 1.51.1
httplib2 0.22.0
humanfriendly 10.0
idna 3.4
importlib-metadata 6.6.0
importlib-resources 5.12.0
iniconfig 2.0.0
jmespath 1.0.1
jsonpatch 1.32
jsonpointer 2.0
jsonschema 4.17.3
jupyter_core 5.3.0
kiwisolver 1.4.4
libmambapy 0.24.0
logmuse 0.2.6
mamba 0.24.0
markdown-it-py 2.2.0
matplotlib 3.4.3
mdurl 0.1.0
multidict 6.0.4
nbformat 5.9.0
numpy 1.22.4
oauth2client 4.1.3
packaging 23.1
pandas 2.0.2
paramiko 3.2.0
patsy 0.5.3
peppy 0.35.5
pip 22.3.1
pkgutil_resolve_name 1.3.10
plac 1.3.5
platformdirs 3.5.1
pluggy 1.0.0
ply 3.11
pooch 1.7.0
prettytable 3.7.0
protobuf 4.21.12
psutil 5.9.5
pyOpenSSL 22.0.0
pyasn1-modules 0.2.7
pyasn1 0.4.8
pycosat 0.6.4
pycparser 2.21
pyparsing 3.0.9
pyrsistent 0.19.3
pysam 0.20.0
pysftp 0.2.9
pytest 7.3.1
python-dateutil 2.8.2
python-irodsclient 1.1.8
pytz 2023.3
pyu2f 0.1.5
requests 2.28.1
reretry 0.11.8
rich 13.4.1
rsa 4.9
ruamel.yaml.clib 0.2.6
ruamel.yaml 0.17.21
s3transfer 0.6.1
scipy 1.10.1
seaborn 0.12.2
setuptools 65.6.3
shyaml 0.6.2
sigProfilerPlotting 1.2.2
sip 6.7.9
six 1.16.0
slacker 0.14.0
smart-open 6.3.0
smmap 3.0.5
snakemake 7.26.0
statsmodels 0.14.0
stone 3.3.1
stopit 1.1.2
tabulate 0.9.0
throttler 1.2.1
toml 0.10.2
tomli 2.0.1
toolz 0.12.0
toposort 1.10
tornado 6.3.2
tqdm 4.64.1
traitlets 5.9.0
typing_extensions 4.6.3
tzdata 2023.3
ubiquerg 0.6.2
uritemplate 4.1.1
urllib3 1.26.14
veracitools 0.1.3
wcwidth 0.2.6
wheel 0.37.1
wrapt 1.15.0
yarl 1.9.2
yte 1.5.1
zipp 3.15.0
zstandard 0.18.0

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gru4/scan2fixedhg38 : latest

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