Ecosyste.ms: Docker

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fnndsc/pl-generate_hdf5 : latest

An app to convert original and segmented brain images in mgz format to .hdf5 format in 3 planes

Latest release: over 4 years ago - 392 downloads - 237 dependencies

JSON

Dependencies

ubuntu/adduser 3.118ubuntu2
ubuntu/apt 2.0.2ubuntu0.1
ubuntu/base-files 11ubuntu5
ubuntu/base-passwd 3.5.47
ubuntu/bash 5.0-6ubuntu1.1
ubuntu/binutils-common 2.34-6ubuntu1
ubuntu/binutils-x86-64-linux-gnu 2.34-6ubuntu1
ubuntu/binutils 2.34-6ubuntu1
ubuntu/bsdutils 1:2.34-0.1ubuntu9
ubuntu/build-essential 12.8ubuntu1
ubuntu/bzip2 1.0.8-2
ubuntu/ca-certificates 20190110ubuntu1.1
ubuntu/coreutils 8.30-3ubuntu2
ubuntu/cpp-9 9.3.0-10ubuntu2
ubuntu/cpp 4:9.3.0-1ubuntu2
ubuntu/dash 0.5.10.2-6
ubuntu/debconf 1.5.73
ubuntu/debianutils 4.9.1
ubuntu/diffutils 1:3.7-3
ubuntu/dirmngr 2.2.19-3ubuntu2
ubuntu/dpkg-dev 1.19.7ubuntu3
ubuntu/dpkg 1.19.7ubuntu3
ubuntu/e2fsprogs 1.45.5-2ubuntu1
ubuntu/fakeroot 1.24-1
ubuntu/fdisk 2.34-0.1ubuntu9
ubuntu/file 1:5.38-4
ubuntu/findutils 4.7.0-1ubuntu1
ubuntu/g -9 9.3.0-10ubuntu2
ubuntu/g 4:9.3.0-1ubuntu2
ubuntu/gcc-10-base 10-20200411-0ubuntu1
ubuntu/gcc-9-base 9.3.0-10ubuntu2
ubuntu/gcc-9 9.3.0-10ubuntu2
ubuntu/gcc 4:9.3.0-1ubuntu2
ubuntu/gnupg-l10n 2.2.19-3ubuntu2
ubuntu/gnupg-utils 2.2.19-3ubuntu2
ubuntu/gnupg 2.2.19-3ubuntu2
ubuntu/gpg-agent 2.2.19-3ubuntu2
ubuntu/gpg-wks-client 2.2.19-3ubuntu2
ubuntu/gpg-wks-server 2.2.19-3ubuntu2
ubuntu/gpg 2.2.19-3ubuntu2
ubuntu/gpgconf 2.2.19-3ubuntu2
ubuntu/gpgsm 2.2.19-3ubuntu2
ubuntu/gpgv 2.2.19-3ubuntu2
ubuntu/grep 3.4-1
ubuntu/gzip 1.10-0ubuntu4
ubuntu/hostname 3.23
ubuntu/init-system-helpers 1.57
ubuntu/libacl1 2.2.53-6
ubuntu/libalgorithm-diff-perl 1.19.03-2
ubuntu/libalgorithm-diff-xs-perl 0.04-6
ubuntu/libalgorithm-merge-perl 0.08-3
ubuntu/libapt-pkg6.0 2.0.2ubuntu0.1
ubuntu/libasan5 9.3.0-10ubuntu2
ubuntu/libasn1-8-heimdal 7.7.0 dfsg-1ubuntu1
ubuntu/libassuan0 2.5.3-7ubuntu2
ubuntu/libatomic1 10-20200411-0ubuntu1
ubuntu/libattr1 1:2.4.48-5
ubuntu/libaudit-common 1:2.8.5-2ubuntu6
ubuntu/libaudit1 1:2.8.5-2ubuntu6
ubuntu/libbinutils 2.34-6ubuntu1
ubuntu/libblkid1 2.34-0.1ubuntu9
ubuntu/libbz2-1.0 1.0.8-2
ubuntu/libc-bin 2.31-0ubuntu9
ubuntu/libc-dev-bin 2.31-0ubuntu9
ubuntu/libc6-dev 2.31-0ubuntu9
ubuntu/libc6 2.31-0ubuntu9
ubuntu/libcap-ng0 0.7.9-2.1build1
ubuntu/libcc1-0 10-20200411-0ubuntu1
ubuntu/libcom-err2 1.45.5-2ubuntu1
ubuntu/libcrypt-dev 1:4.4.10-10ubuntu4
ubuntu/libcrypt1 1:4.4.10-10ubuntu4
ubuntu/libctf-nobfd0 2.34-6ubuntu1
ubuntu/libctf0 2.34-6ubuntu1
ubuntu/libdb5.3 5.3.28 dfsg1-0.6ubuntu2
ubuntu/libdebconfclient0 0.251ubuntu1
ubuntu/libdpkg-perl 1.19.7ubuntu3
ubuntu/libexpat1-dev 2.2.9-1build1
ubuntu/libexpat1 2.2.9-1build1
ubuntu/libext2fs2 1.45.5-2ubuntu1
ubuntu/libfakeroot 1.24-1
ubuntu/libfdisk1 2.34-0.1ubuntu9
ubuntu/libffi7 3.3-4
ubuntu/libfile-fcntllock-perl 0.22-3build4
ubuntu/libgcc-9-dev 9.3.0-10ubuntu2
ubuntu/libgcc-s1 10-20200411-0ubuntu1
ubuntu/libgcrypt20 1.8.5-5ubuntu1
ubuntu/libgdbm-compat4 1.18.1-5
ubuntu/libgdbm6 1.18.1-5
ubuntu/libgmp10 2:6.2.0 dfsg-4
ubuntu/libgnutls30 3.6.13-2ubuntu1.2
ubuntu/libgomp1 10-20200411-0ubuntu1
ubuntu/libgpg-error0 1.37-1
ubuntu/libgssapi3-heimdal 7.7.0 dfsg-1ubuntu1
ubuntu/libhcrypto4-heimdal 7.7.0 dfsg-1ubuntu1
ubuntu/libheimbase1-heimdal 7.7.0 dfsg-1ubuntu1
ubuntu/libheimntlm0-heimdal 7.7.0 dfsg-1ubuntu1
ubuntu/libhogweed5 3.5.1 really3.5.1-2
ubuntu/libhx509-5-heimdal 7.7.0 dfsg-1ubuntu1
ubuntu/libidn2-0 2.2.0-2
ubuntu/libisl22 0.22.1-1
ubuntu/libitm1 10-20200411-0ubuntu1
ubuntu/libkrb5-26-heimdal 7.7.0 dfsg-1ubuntu1
ubuntu/libksba8 1.3.5-2
ubuntu/libldap-2.4-2 2.4.49 dfsg-2ubuntu1.3
ubuntu/libldap-common 2.4.49 dfsg-2ubuntu1.3
ubuntu/liblocale-gettext-perl 1.07-4
ubuntu/liblsan0 10-20200411-0ubuntu1
ubuntu/liblz4-1 1.9.2-2
ubuntu/liblzma5 5.2.4-1
ubuntu/libmagic-mgc 1:5.38-4
ubuntu/libmagic1 1:5.38-4
ubuntu/libmount1 2.34-0.1ubuntu9
ubuntu/libmpc3 1.1.0-1
ubuntu/libmpdec2 2.4.2-3
ubuntu/libmpfr6 4.0.2-1
ubuntu/libncurses6 6.2-0ubuntu2
ubuntu/libncursesw6 6.2-0ubuntu2
ubuntu/libnettle7 3.5.1 really3.5.1-2
ubuntu/libnpth0 1.6-1
ubuntu/libp11-kit0 0.23.20-1build1
ubuntu/libpam-modules-bin 1.3.1-5ubuntu4
ubuntu/libpam-modules 1.3.1-5ubuntu4
ubuntu/libpam-runtime 1.3.1-5ubuntu4
ubuntu/libpam0g 1.3.1-5ubuntu4
ubuntu/libpcre2-8-0 10.34-7
ubuntu/libpcre3 2:8.39-12build1
ubuntu/libperl5.30 5.30.0-9build1
ubuntu/libprocps8 2:3.3.16-1ubuntu2
ubuntu/libpython3-dev 3.8.2-0ubuntu2
ubuntu/libpython3-stdlib 3.8.2-0ubuntu2
ubuntu/libpython3.8-dev 3.8.2-1ubuntu1.2
ubuntu/libpython3.8-minimal 3.8.2-1ubuntu1.2
ubuntu/libpython3.8-stdlib 3.8.2-1ubuntu1.2
ubuntu/libpython3.8 3.8.2-1ubuntu1.2
ubuntu/libquadmath0 10-20200411-0ubuntu1
ubuntu/libreadline8 8.0-4
ubuntu/libroken18-heimdal 7.7.0 dfsg-1ubuntu1
ubuntu/libsasl2-2 2.1.27 dfsg-2
ubuntu/libsasl2-modules-db 2.1.27 dfsg-2
ubuntu/libsasl2-modules 2.1.27 dfsg-2
ubuntu/libseccomp2 2.4.3-1ubuntu3.20.04.2
ubuntu/libselinux1 3.0-1build2
ubuntu/libsemanage-common 3.0-1build2
ubuntu/libsemanage1 3.0-1build2
ubuntu/libsepol1 3.0-1
ubuntu/libsmartcols1 2.34-0.1ubuntu9
ubuntu/libsqlite3-0 3.31.1-4ubuntu0.1
ubuntu/libss2 1.45.5-2ubuntu1
ubuntu/libssl1.1 1.1.1f-1ubuntu2
ubuntu/libstdc -9-dev 9.3.0-10ubuntu2
ubuntu/libstdc 6 10-20200411-0ubuntu1
ubuntu/libsystemd0 245.4-4ubuntu3.1
ubuntu/libtasn1-6 4.16.0-2
ubuntu/libtinfo6 6.2-0ubuntu2
ubuntu/libtsan0 10-20200411-0ubuntu1
ubuntu/libubsan1 10-20200411-0ubuntu1
ubuntu/libudev1 245.4-4ubuntu3.1
ubuntu/libunistring2 0.9.10-2
ubuntu/libuuid1 2.34-0.1ubuntu9
ubuntu/libwind0-heimdal 7.7.0 dfsg-1ubuntu1
ubuntu/libzstd1 1.4.4 dfsg-3
ubuntu/linux-libc-dev 5.4.0-42.46
ubuntu/login 1:4.8.1-1ubuntu5.20.04
ubuntu/logsave 1.45.5-2ubuntu1
ubuntu/lsb-base 11.1.0ubuntu2
ubuntu/make 4.2.1-1.2
ubuntu/manpages-dev 5.05-1
ubuntu/manpages 5.05-1
ubuntu/mawk 1.3.4.20200120-2
ubuntu/mime-support 3.64ubuntu1
ubuntu/mount 2.34-0.1ubuntu9
ubuntu/ncurses-base 6.2-0ubuntu2
ubuntu/ncurses-bin 6.2-0ubuntu2
ubuntu/netbase 6.1
ubuntu/openssl 1.1.1f-1ubuntu2
ubuntu/passwd 1:4.8.1-1ubuntu5.20.04
ubuntu/patch 2.7.6-6
ubuntu/perl-base 5.30.0-9build1
ubuntu/perl-modules-5.30 5.30.0-9build1
ubuntu/perl 5.30.0-9build1
ubuntu/pinentry-curses 1.1.0-3build1
ubuntu/procps 2:3.3.16-1ubuntu2
ubuntu/python-pip-whl 20.0.2-5ubuntu1
ubuntu/python3-dev 3.8.2-0ubuntu2
ubuntu/python3-distutils 3.8.2-1ubuntu1
ubuntu/python3-lib2to3 3.8.2-1ubuntu1
ubuntu/python3-minimal 3.8.2-0ubuntu2
ubuntu/python3-pip 20.0.2-5ubuntu1
ubuntu/python3-pkg-resources 45.2.0-1
ubuntu/python3-setuptools 45.2.0-1
ubuntu/python3-wheel 0.34.2-1
ubuntu/python3.8-dev 3.8.2-1ubuntu1.2
ubuntu/python3.8-minimal 3.8.2-1ubuntu1.2
ubuntu/python3.8 3.8.2-1ubuntu1.2
ubuntu/python3 3.8.2-0ubuntu2
ubuntu/readline-common 8.0-4
ubuntu/sed 4.7-1
ubuntu/sensible-utils 0.0.12 nmu1
ubuntu/sysvinit-utils 2.96-2.1ubuntu1
ubuntu/tar 1.30 dfsg-7
ubuntu/ubuntu-keyring 2020.02.11.2
ubuntu/util-linux 2.34-0.1ubuntu9
ubuntu/xz-utils 5.2.4-1
ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu1
ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu1

bash 5.0.17

Pillow 7.2.0
PyWavelets 1.1.1
Pygments 2.7.0
certifi 2020.6.20
chrisapp 1.1.6
cycler 0.10.0
decorator 4.4.2
future 0.18.2
h5py 2.10.0
imageio 2.9.0
kiwisolver 1.2.0
matplotlib 3.3.2
mypy 0.770
networkx 2.5
nibabel 3.1.1
numpy 1.19.2
packaging 20.4
pip 20.0.2
pip 20.2.3
pudb 2019.2
pyparsing 2.4.7
python-dateutil 2.8.1
scikit-image 0.17.2
scipy 1.5.2
setuptools 45.2.0
six 1.15.0
tifffile 2020.9.3
torch 1.6.0
torchvision 0.7.0
urwid 2.1.1
wheel 0.34.2