Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
evolomicsmbbt/rna_seq : latest
Latest release: about 2 years ago - 89 downloads - 412 dependencies
JSONDependencies
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.56.2
- BBmisc 1.11
- BH 1.74.0-1
- BatchJobs 1.8
- Biobase 2.54.0
- BiocGenerics 0.40.0
- BiocManager 1.30.16
- BiocParallel 1.28.3
- BiocVersion 3.14.0
- Biostrings 2.62.0
- CVST 0.2-2
- DBI 1.1.2
- DBItest 1.7.2
- DESeq2 1.34.0
- DEoptimR 1.0-10
- DRR 0.0.4
- DT 0.17
- DelayedArray 0.20.0
- FNN 1.1.3
- Formula 1.2-4
- GenomeInfoDb 1.30.1
- GenomeInfoDbData 1.2.7
- GenomicRanges 1.46.1
- Hmisc 4.6-0
- IRanges 2.28.0
- KEGGREST 1.34.0
- KernSmooth 2.23-20
- MASS 7.3-55
- MLmetrics 1.1.1
- Matrix 1.4-0
- MatrixGenerics 1.6.0
- MatrixModels 0.5-0
- ModelMetrics 1.2.2.2
- R6 2.5.1
- RANN 2.6.1
- RColorBrewer 1.1-2
- RCurl 1.98-1.6
- RMySQL 0.10.23
- ROCR 1.0-11
- RPostgreSQL 0.7-3
- RSQLite 2.2.9
- RSpectra 0.16-0
- RUnit 0.4.32
- Rcpp 1.0.8
- RcppArmadillo 0.10.8.1.0
- RcppEigen 0.3.3.9.1
- RcppNumerical 0.4-0
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppRoll 0.3.0
- Rhtslib 1.26.0
- Rmpi 0.6-9.2
- Rsamtools 2.10.0
- S4Vectors 0.32.3
- SQUAREM 2021.1
- SparseM 1.81
- SummarizedExperiment 1.24.0
- TH.data 1.1-0
- TTR 0.24.3
- TeachingDemos 2.12
- XML 3.99-0.9
- XVector 0.34.0
- abind 1.4-5
- acepack 1.4.1
- affy 1.72.0
- affyio 1.64.0
- annotate 1.72.0
- apeglm 1.16.0
- ashr 2.2-54
- askpass 1.1
- assertthat 0.2.1
- backports 1.4.1
- base64enc 0.1-3
- base64url 1.4
- base 4.1.2
- batchtools 0.9.15
- bbmle 1.0.25
- bdsmatrix 1.3-6
- bench 1.1.2
- bit64 4.0.5
- bit 4.0.4
- bitops 1.0-7
- blob 1.2.2
- boot 1.3-28
- brew 1.0-7
- brio 1.1.3
- broom 0.7.12
- caTools 1.18.2
- cachem 1.0.6
- callr 3.7.0
- caret 6.0-90
- cba 0.2-21
- checkmate 2.0.0
- chron 2.3-56
- class 7.3-20
- classInt 0.4-3
- cli 3.2.0
- cliapp 0.1.1
- clipr 0.8.0
- cluster 2.1.2
- coda 0.19-4
- codetools 0.2-18
- colorspace 2.0-2
- commonmark 1.7
- compiler 4.1.2
- conquer 1.2.2
- covr 3.5.1
- cpp11 0.4.2
- crayon 1.5.0
- crosstalk 1.2.0
- curl 4.3.2
- data.table 1.14.2
- datasets 4.1.2
- dbplyr 2.1.1
- ddalpha 1.3.11
- decor 1.0.1
- deldir 1.0-6
- desc 1.4.0
- diffobj 0.3.5
- digest 0.6.29
- dimRed 0.2.4
- doMC 1.3.8
- doParallel 1.0.17
- dplyr 1.0.8
- dygraphs 1.1.1.6
- e1071 1.7-9
- earth 5.3.1
- ellipsis 0.3.2
- emdbook 1.3.12
- etrunct 0.1
- evaluate 0.15
- fansi 1.0.2
- farver 2.1.0
- fastICA 1.2-3
- fastmap 1.1.0
- fastmatch 1.1-3
- filehash 2.4-2
- fontBitstreamVera 0.1.1
- fontLiberation 0.1.0
- fontquiver 0.2.1
- foreach 1.5.2
- foreign 0.8-82
- formatR 1.11
- fs 1.5.2
- fts 0.9.9.2
- furrr 0.2.3
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.8.1
- future 1.24.0
- gdata 2.18.0
- genefilter 1.76.0
- geneplotter 1.72.0
- generics 0.1.2
- geometry 0.4.5
- geosphere 1.5-14
- ggplot2 3.3.5
- gh 1.3.0
- gitcreds 0.1.1
- globals 0.14.0
- glue 1.6.1
- goftest 1.2-3
- gower 1.0.0
- gplots 3.1.1
- grDevices 4.1.2
- graphics 4.1.2
- grid 4.1.2
- gridExtra 2.3
- gtable 0.3.0
- gtools 3.9.2
- hexbin 1.28.2
- highr 0.9
- hms 1.1.1
- htmlTable 2.4.0
- htmltools 0.5.2
- htmlwidgets 1.5.4
- httpuv 1.6.5
- httr 1.4.2
- igraph 1.2.11
- ini 0.3.1
- interp 1.0-33
- invgamma 1.1
- ipred 0.9-12
- irlba 2.3.5.1
- isoband 0.2.5
- iterators 1.0.14
- jpeg 0.1-9
- jsonlite 1.7.3
- kernlab 0.9-29
- knitr 1.37
- ks 1.13.3
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.0
- lattice 0.20-45
- latticeExtra 0.6-29
- lava 1.6.10
- lazyeval 0.2.2
- lifecycle 1.0.1
- limma 3.50.3
- linkXTS 1.0
- linprog 0.9-2
- listenv 0.8.0
- littler 0.3.15
- lme4 1.1-28
- lobstr 1.1.1
- locfit 1.5-9.4
- logcondens 2.1.6
- lpSolve 5.6.15
- lubridate 1.8.0
- lwgeom 0.2-8
- magic 1.6-0
- magrittr 2.0.2
- mapproj 1.2.8
- maps 3.4.0
- maptools 1.1-2
- markdown 1.1
- matrixStats 0.61.0
- mclust 5.4.9
- mda 0.5-2
- memoise 2.0.1
- methods 4.1.2
- mets 1.2.9
- mgcv 1.8-39
- mime 0.12
- minqa 1.2.4
- misc3d 0.9-1
- mixsqp 0.3-48
- mlbench 2.1-3
- mockery 0.4.3
- mockr 0.1
- modeldata 0.1.1
- multcomp 1.4-18
- multicool 0.1-12
- munsell 0.5.0
- mvtnorm 1.1-3
- mvtnormAPI 1.0-0
- nlme 3.1-155
- nloptr 2.0.0
- nnet 7.3-17
- numDeriv 2016.8-1.1
- openssl 1.4.6
- org.testing.db 0.1
- pROC 1.18.0
- palmerpenguins 0.1.0
- parallel 4.1.2
- parallelly 1.30.0
- pillar 1.7.0
- pkgKitten 0.2.2
- pkgbuild 1.3.1
- pkgconfig 2.0.3
- pkgload 1.2.4
- plogr 0.2.0
- plot3D 1.4
- plotmo 3.6.1
- plotrix 3.8-2
- pls 2.8-0
- plyr 1.8.6
- png 0.1-7
- polyclip 1.10-0
- pracma 2.3.6
- praise 1.0.0
- preprocessCore 1.56.0
- prettycode 1.1.0
- prettyunits 1.1.1
- processx 3.5.2
- prodlim 2019.11.13
- profmem 0.6.0
- progress 1.2.2
- progressr 0.10.0
- promises 1.2.0.1
- proxy 0.4-26
- ps 1.6.0
- purrr 0.3.4
- quadprog 1.5-8
- quantmod 0.4.18
- quantreg 5.88
- ragg 1.2.1
- ranger 0.13.1
- rappdirs 0.3.3
- raster 3.5-15
- readr 2.1.2
- recipes 0.1.17
- rematch2 2.1.2
- reshape2 1.4.4
- rex 1.2.1
- rgdal 1.5-28
- rgl 0.108.3
- rlang 1.0.1
- rmarkdown 2.6
- robustbase 0.93-9
- rpart 4.1.16
- rprojroot 2.0.2
- rsample 0.1.1
- rstudioapi 0.13
- s2 1.0.7
- sandwich 3.0-1
- sass 0.4.0
- scales 1.1.1
- selectr 0.4-2
- sendmailR 1.2-1
- setRNG 2013.9-1
- sf 1.0-6
- sfsmisc 1.1-12
- shiny 1.5.0
- slider 0.2.2
- snow 0.4-4
- sodium 1.2.0
- sourcetools 0.1.7
- sp 1.4-6
- spatial 7.3-15
- spatstat.core 2.3-2
- spatstat.data 2.1-2
- spatstat.geom 2.3-2
- spatstat.linnet 2.3-1
- spatstat.sparse 2.1-0
- spatstat.utils 2.3-0
- spatstat 2.3-0
- splines 4.1.2
- statmod 1.4.36
- stats4 4.1.2
- stats 4.1.2
- stringi 1.7.6
- stringr 1.4.0
- survival 3.2-13
- svglite 2.1.0
- sys 3.4
- systemfonts 1.0.4
- tcltk 4.1.2
- tensor 1.5
- terra 1.5-21
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testit 0.13
- testthat 3.1.2
- textshaping 0.3.6
- tibble 3.1.6
- tidyr 1.2.0
- tidyselect 1.1.2
- tikzDevice 0.12.3.1
- timeDate 3043.102
- timeSeries 3062.100
- timereg 2.0.1
- tinytex 0.37
- tools 4.1.2
- translations 4.1.2
- truncnorm 1.0-8
- tseries 0.10-49
- tximport 1.22.0
- tzdb 0.2.0
- units 0.8-0
- utf8 1.2.2
- utils 4.1.2
- vctrs 0.3.8
- vdiffr 1.0.2
- viridis 0.6.2
- viridisLite 0.4.0
- vroom 1.5.7
- vsn 3.62.0
- waldo 0.3.1
- warp 0.2.0
- webutils 1.1
- withr 2.4.3
- wk 0.6.0
- wkutils 0.1.1
- xfun 0.29
- xml2 1.3.3
- xtable 1.8-4
- xts 0.12.1
- yaml 2.3.5
- zlibbioc 1.40.0
- zoo 1.8-9
- args4j:args4j 2.33
- com.github.cliftonlabs:json-simple 2.3.0
- commons-io:commons-io 2.11.0
- fastqc:fastqc 0.11.9
- htsjdk:htsjdk 2.24.1
- jbzip2:jbzip2 0.9.1
- jrt-fs:jrt-fs 11.0.17
- ngs-java:ngs-java 2.11.2
- org.GNOME.Accessibility.AtkWrapper:java-atk-wrapper *
- org.apache.commons:commons-compress 1.21
- org.apache.commons:commons-jexl 2.1.1
- org.apache.commons:commons-lang3 3.11
- org.apache.commons:commons-math3 3.6.1
- org.apache:jexl 2.1.1
- org.apache:logging 1.2
- org.debian.security.UpdateCertificates:ca-certificates-java *
- org.xerial.snappy:snappy-java 1.1.8.3
- sis-base:sis-base 18.09~pre1 git20180928.45fbd31
- sis-jhdf5:sis-jhdf5 19.04.0 dfsg
- @types/highlight.js 9.12.4
- @types/node 12.20.42
- canonicalize 1.0.8
- font-awesome 4.7.0
- highlight.js 9.18.5
- html5shiv 3.7.3
- normalize.css 8.0.1
- PyGObject 3.42.1
- dbus-python 1.2.18
- pip 22.0.2
- setuptools 59.6.0
- wheel 0.37.1