dhspence/docker-vep : 93

Latest release: over 7 years ago - 101 downloads - 1,191 dependencies

JSON

Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
AnnotationDbi 1.42.1
futile.options 1.0.1
gdata 2.18.0
genefilter 1.62.0
geneplotter 1.58.0
ggplot2 3.0.0
ggrepel 0.8.0
fansi 0.2.3
tools 3.5.0
AnnotationForge 1.22.0
BBmisc 1.11
BH 1.66.0-1
BSgenome 1.48.0
BatchJobs 1.7
Biobase 2.40.0
BiocGenerics 0.26.0
BiocInstaller 1.30.0
BiocParallel 1.14.2
Biostrings 2.48.0
Category 2.46.0
DBI 1.0.0
DESeq2 1.20.0
DelayedArray 0.6.1
DelayedMatrixStats 1.2.0
DiffBind 2.8.0
FField 0.1.0
Formula 1.2-3
GO.db 3.6.0
GOstats 2.46.0
GSEABase 1.42.0
GenVisR 1.12.1
GenomeInfoDb 1.16.0
GenomeInfoDbData 1.1.0
GenomicAlignments 1.16.0
GenomicFeatures 1.32.0
GenomicRanges 1.32.4
HDF5Array 1.8.1
Hmisc 4.1-1
IRanges 2.14.10
KernSmooth 2.23-15
MASS 7.3-50
Matrix 1.2-14
R.methodsS3 1.7.1
R.oo 1.22.0
R.utils 2.6.0
R6 2.2.2
RBGL 1.56.0
RColorBrewer 1.1-2
RCurl 1.95-4.11
RSQLite 2.1.1
Rcpp 0.12.17
RcppArmadillo 0.8.600.0.0
Rgraphviz 2.24.0
Rhdf5lib 1.2.1
Rsamtools 1.32.2
S4Vectors 0.18.3
ShortRead 1.38.0
SummarizedExperiment 1.10.1
VariantAnnotation 1.26.1
XML 3.98-1.12
XVector 0.20.0
acepack 1.4.1
amap 0.8-16
annotate 1.58.0
assertthat 0.2.0
backports 1.1.2
base64enc 0.1-3
base 3.5.0
bindr 0.1.1
bindrcpp 0.2.2
biomaRt 2.36.1
bit64 0.9-7
bit 1.1-14
bitops 1.0-6
blob 1.1.1
brew 1.0-6
broom 0.5.0
bsseq 1.16.1
caTools 1.17.1
callr 2.0.4
cellranger 1.1.0
checkmate 1.8.5
cli 1.0.0
clipr 0.4.1
cluster 2.0.7-1
colorspace 1.3-2
compiler 3.5.0
crayon 1.3.4
curl 3.2
data.table 1.11.4
datasets 3.5.0
dbplyr 1.2.1
dichromat 2.0-0
digest 0.6.15
docopt 0.4.5
dplyr 0.7.6
edgeR 3.22.3
evaluate 0.11
forcats 0.3.0
foreign 0.8-70
formatR 1.5
futile.logger 1.4.3
glue 1.3.0
gplots 3.0.1
grDevices 3.5.0
graph 1.58.0
graphics 3.5.0
grid 3.5.0
gridExtra 2.3
gtable 0.2.0
gtools 3.8.1
haven 1.1.2
highr 0.7
hms 0.4.2
htmlTable 1.12
htmltools 0.3.6
htmlwidgets 1.2
httr 1.3.1
hwriter 1.3.2
jsonlite 1.5
knitr 1.20
labeling 0.3
lambda.r 1.2.3
lattice 0.20-35
latticeExtra 0.6-28
lazyeval 0.2.1
limma 3.36.2
littler 0.3.3
locfit 1.5-9.1
lubridate 1.7.4
magrittr 1.5
markdown 0.8
matrixStats 0.53.1
memoise 1.1.0
methods 3.5.0
mgcv 1.8-24
mime 0.5
modelr 0.1.2
munsell 0.5.0
nlme 3.1-137
nnet 7.3-12
openssl 1.0.1
org.testing.db 0.1
parallel 3.5.0
permute 0.9-4
pheatmap 1.0.10
pillar 1.3.0
pkgconfig 2.0.1
plogr 0.2.0
plotrix 3.7-2
plyr 1.8.4
png 0.1-7
praise 1.0.0
prettyunits 1.0.2
processx 3.1.0
progress 1.2.0
purrr 0.2.5
readr 1.1.1
readxl 1.1.0
rematch 1.0.1
reprex 0.2.0
reshape2 1.4.3
rhdf5 2.24.0
rjson 0.2.20
rlang 0.2.1
rmarkdown 1.10
rpart 4.1-13
rprojroot 1.3-2
rstudioapi 0.7
rtracklayer 1.40.3
rvest 0.3.2
scales 0.5.0
selectr 0.4-1
sendmailR 1.2-1
seqnames.db @VERSION@
snow 0.4-2
splines 3.5.0
stats4 3.5.0
stats 3.5.0
stringi 1.2.3
stringr 1.3.1
survival 2.42-6
systemPipeR 1.14.0
tcltk 3.5.0
testRcppClass 0.1
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 2.0.0
tibble 1.4.2
tidyr 0.8.1
tidyselect 0.2.4
tidyverse 1.2.1
tinytex 0.6
translations 3.5.0
utf8 1.1.4
utils 3.5.0
viridis 0.5.1
viridisLite 0.3.0
whisker 0.3-2
withr 2.1.2
xfun 0.3
xml2 1.2.0
xtable 1.8-2
yaml 2.1.19
zlibbioc 1.26.0

ubuntu/adduser 3.113 nmu3ubuntu4
ubuntu/adwaita-icon-theme 3.18.0-2ubuntu3.1
ubuntu/ant 1.9.6-1ubuntu1
ubuntu/apt 1.2.26
ubuntu/base-files 9.4ubuntu4.6
ubuntu/base-passwd 3.5.39
ubuntu/bash-completion 1:2.1-4.2ubuntu1.1
ubuntu/bash 4.3-14ubuntu1.2
ubuntu/bc 1.06.95-9build1
ubuntu/bind9-host 1:9.10.3.dfsg.P4-8ubuntu1.10
ubuntu/binutils 2.26.1-1ubuntu1~16.04.6
ubuntu/bsdutils 1:2.27.1-6ubuntu3.4
ubuntu/build-essential 12.1ubuntu2
ubuntu/bzip2 1.0.6-8
ubuntu/ca-certificates-java 20160321ubuntu1
ubuntu/ca-certificates 20170717~16.04.1
ubuntu/coreutils 8.25-2ubuntu3~16.04
ubuntu/cpp-5 5.4.0-6ubuntu1~16.04.10
ubuntu/cpp 4:5.3.1-1ubuntu1
ubuntu/cracklib-runtime 2.9.2-1ubuntu1
ubuntu/curl 7.47.0-1ubuntu2.8
ubuntu/dash 0.5.8-2.1ubuntu2
ubuntu/dconf-gsettings-backend 0.24.0-2
ubuntu/dconf-service 0.24.0-2
ubuntu/debconf 1.5.58ubuntu1
ubuntu/debianutils 4.7
ubuntu/default-jdk-headless 2:1.8-56ubuntu2
ubuntu/default-jdk 2:1.8-56ubuntu2
ubuntu/default-jre-headless 2:1.8-56ubuntu2
ubuntu/default-jre 2:1.8-56ubuntu2
ubuntu/diffutils 1:3.3-3
ubuntu/dpkg-dev 1.18.4ubuntu1.4
ubuntu/dpkg 1.18.4ubuntu1.4
ubuntu/e2fslibs 1.42.13-1ubuntu1
ubuntu/e2fsprogs 1.42.13-1ubuntu1
ubuntu/emacs-goodies-el 35.12ubuntu2
ubuntu/emacs24-bin-common 24.5 1-6ubuntu1.1
ubuntu/emacs24-common-non-dfsg 24.4 1-2
ubuntu/emacs24-common 24.5 1-6ubuntu1.1
ubuntu/emacs24 24.5 1-6ubuntu1.1
ubuntu/emacs 46.1
ubuntu/emacsen-common 2.0.8
ubuntu/evince-common 3.18.2-1ubuntu4.3
ubuntu/evince 3.18.2-1ubuntu4.3
ubuntu/file 1:5.25-2ubuntu1.1
ubuntu/findutils 4.6.0 git 20160126-2
ubuntu/fontconfig-config 2.11.94-0ubuntu1.1
ubuntu/fontconfig 2.11.94-0ubuntu1.1
ubuntu/fonts-cabin 1.5-2
ubuntu/fonts-comfortaa 2.003-1
ubuntu/fonts-crosextra-caladea 20130214-1
ubuntu/fonts-crosextra-carlito 20130920-1
ubuntu/fonts-dejavu-core 2.35-1
ubuntu/fonts-dejavu-extra 2.35-1
ubuntu/fonts-ebgaramond-extra 0.015 git20130628-3
ubuntu/fonts-ebgaramond 0.015 git20130628-3
ubuntu/fonts-font-awesome 4.5.0~dfsg-1
ubuntu/fonts-freefont-otf 20120503-4
ubuntu/fonts-freefont-ttf 20120503-4
ubuntu/fonts-gfs-artemisia 1.1-5
ubuntu/fonts-gfs-complutum 1.1-6
ubuntu/fonts-gfs-didot 1.1-6
ubuntu/fonts-gfs-neohellenic 1.1-6
ubuntu/fonts-gfs-olga 1.1-5
ubuntu/fonts-gfs-solomos 1.1-5
ubuntu/fonts-junicode 0.7.8-2
ubuntu/fonts-lato 2.0-1
ubuntu/fonts-linuxlibertine 5.3.0-2
ubuntu/fonts-lobster 2.0-2
ubuntu/fonts-lobstertwo 2.0-2
ubuntu/fonts-oflb-asana-math 000.907-6
ubuntu/fonts-roboto-hinted 2:0~20160106-1ubuntu0.1
ubuntu/fonts-sil-gentium-basic 1.1-7
ubuntu/fonts-sil-gentium 20081126:1.03-1
ubuntu/fonts-sil-gentiumplus 5.000-1
ubuntu/fonts-stix 1.1.1-4
ubuntu/fonts-texgyre 20150923-1
ubuntu/g -5 5.4.0-6ubuntu1~16.04.10
ubuntu/g 4:5.3.1-1ubuntu1
ubuntu/gawk 1:4.1.3 dfsg-0.1
ubuntu/gcc-5-base 5.4.0-6ubuntu1~16.04.10
ubuntu/gcc-5 5.4.0-6ubuntu1~16.04.10
ubuntu/gcc-6-base 6.0.1-0ubuntu1
ubuntu/gcc 4:5.3.1-1ubuntu1
ubuntu/gconf-service-backend 3.2.6-3ubuntu6
ubuntu/gconf-service 3.2.6-3ubuntu6
ubuntu/gconf2-common 3.2.6-3ubuntu6
ubuntu/geoip-database 20160408-1
ubuntu/gfortran-5 5.4.0-6ubuntu1~16.04.10
ubuntu/gfortran 4:5.3.1-1ubuntu1
ubuntu/gir1.2-freedesktop 1.46.0-3ubuntu1
ubuntu/gir1.2-glib-2.0 1.46.0-3ubuntu1
ubuntu/gir1.2-pango-1.0 1.38.1-1
ubuntu/git-man 1:2.7.4-0ubuntu1.4
ubuntu/git 1:2.7.4-0ubuntu1.4
ubuntu/glib-networking-common 2.48.2-1~ubuntu16.04.1
ubuntu/glib-networking-services 2.48.2-1~ubuntu16.04.1
ubuntu/glib-networking 2.48.2-1~ubuntu16.04.1
ubuntu/gnupg 1.4.20-1ubuntu3.1
ubuntu/gpgv 1.4.20-1ubuntu3.1
ubuntu/grep 2.25-1~16.04.1
ubuntu/gsettings-desktop-schemas 3.18.1-1ubuntu1
ubuntu/gsfonts 1:8.11 urwcyr1.0.7~pre44-4.2ubuntu1
ubuntu/gstreamer1.0-plugins-base 1.8.3-1ubuntu0.2
ubuntu/gzip 1.6-4ubuntu1
ubuntu/hicolor-icon-theme 0.15-0ubuntu1
ubuntu/hostname 3.16ubuntu2
ubuntu/humanity-icon-theme 0.6.10.1
ubuntu/icu-devtools 55.1-7ubuntu0.4
ubuntu/imagemagick-common 8:6.8.9.9-7ubuntu5.12
ubuntu/init-system-helpers 1.29ubuntu4
ubuntu/init 1.29ubuntu4
ubuntu/initscripts 2.88dsf-59.3ubuntu2
ubuntu/insserv 1.14.0-5ubuntu3
ubuntu/iso-codes 3.65-1
ubuntu/java-common 0.56ubuntu2
ubuntu/ldap-utils 2.4.42 dfsg-2ubuntu3.3
ubuntu/less 481-2.1ubuntu0.2
ubuntu/libacl1 2.2.52-3
ubuntu/libapparmor1 2.10.95-0ubuntu2.9
ubuntu/libapt-pkg5.0 1.2.26
ubuntu/libarchive13 3.1.2-11ubuntu0.16.04.3
ubuntu/libasan2 5.4.0-6ubuntu1~16.04.10
ubuntu/libasn1-8-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libasound2-data 1.1.0-0ubuntu1
ubuntu/libasound2 1.1.0-0ubuntu1
ubuntu/libasyncns0 0.8-5build1
ubuntu/libatk-bridge2.0-0 2.18.1-2ubuntu1
ubuntu/libatk1.0-0 2.18.0-1
ubuntu/libatk1.0-data 2.18.0-1
ubuntu/libatomic1 5.4.0-6ubuntu1~16.04.10
ubuntu/libatspi2.0-0 2.18.3-4ubuntu1
ubuntu/libattr1 1:2.4.47-2
ubuntu/libaudit-common 1:2.4.5-1ubuntu2.1
ubuntu/libaudit1 1:2.4.5-1ubuntu2.1
ubuntu/libavahi-client3 0.6.32~rc dfsg-1ubuntu2.2
ubuntu/libavahi-common-data 0.6.32~rc dfsg-1ubuntu2.2
ubuntu/libavahi-common3 0.6.32~rc dfsg-1ubuntu2.2
ubuntu/libbasicobjects0 0.5.0-1
ubuntu/libbind9-140 1:9.10.3.dfsg.P4-8ubuntu1.10
ubuntu/libblas-common 3.6.0-2ubuntu2
ubuntu/libblas-dev 3.6.0-2ubuntu2
ubuntu/libblas3 3.6.0-2ubuntu2
ubuntu/libblkid1 2.27.1-6ubuntu3.4
ubuntu/libboost-filesystem1.58.0 1.58.0 dfsg-5ubuntu3.1
ubuntu/libboost-system1.58.0 1.58.0 dfsg-5ubuntu3.1
ubuntu/libbsd0 0.8.2-1
ubuntu/libbz2-1.0 1.0.6-8
ubuntu/libbz2-dev 1.0.6-8
ubuntu/libc-ares2 1.10.0-3ubuntu0.2
ubuntu/libc-bin 2.23-0ubuntu10
ubuntu/libc-dev-bin 2.23-0ubuntu10
ubuntu/libc6-dev 2.23-0ubuntu10
ubuntu/libc6 2.23-0ubuntu10
ubuntu/libcairo-gobject2 1.14.6-1
ubuntu/libcairo-script-interpreter2 1.14.6-1
ubuntu/libcairo2-dev 1.14.6-1
ubuntu/libcairo2 1.14.6-1
ubuntu/libcap2-bin 1:2.24-12
ubuntu/libcap2 1:2.24-12
ubuntu/libcapnp-0.5.3 0.5.3-2ubuntu1
ubuntu/libcc1-0 5.4.0-6ubuntu1~16.04.10
ubuntu/libcdparanoia0 3.10.2 debian-11
ubuntu/libcilkrts5 5.4.0-6ubuntu1~16.04.10
ubuntu/libcollection4 0.5.0-1
ubuntu/libcolord2 1.2.12-1ubuntu1
ubuntu/libcomerr2 1.42.13-1ubuntu1
ubuntu/libcrack2 2.9.2-1ubuntu1
ubuntu/libcroco3 0.6.11-1
ubuntu/libcryptsetup4 2:1.6.6-5ubuntu2.1
ubuntu/libcups2 2.1.3-4ubuntu0.5
ubuntu/libcupsfilters1 1.8.3-2ubuntu3.4
ubuntu/libcupsimage2 2.1.3-4ubuntu0.5
ubuntu/libcurl3-gnutls 7.47.0-1ubuntu2.8
ubuntu/libcurl3 7.47.0-1ubuntu2.8
ubuntu/libcurl4-openssl-dev 7.47.0-1ubuntu2.8
ubuntu/libdatrie1 0.2.10-2
ubuntu/libdb5.3 5.3.28-11ubuntu0.1
ubuntu/libdbus-1-3 1.10.6-1ubuntu3.3
ubuntu/libdbus-glib-1-2 0.106-1
ubuntu/libdconf1 0.24.0-2
ubuntu/libdebconfclient0 0.198ubuntu1
ubuntu/libisc160 1:9.10.3.dfsg.P4-8ubuntu1.10
ubuntu/libdevmapper1.02.1 2:1.02.110-1ubuntu10
ubuntu/libdhash1 0.5.0-1
ubuntu/libdjvulibre-text 3.5.27.1-5
ubuntu/libdjvulibre21 3.5.27.1-5
ubuntu/libdns162 1:9.10.3.dfsg.P4-8ubuntu1.10
ubuntu/libdpkg-perl 1.18.4ubuntu1.4
ubuntu/libdrm-amdgpu1 2.4.91-2~16.04.1
ubuntu/libdrm-common 2.4.91-2~16.04.1
ubuntu/libdrm-intel1 2.4.91-2~16.04.1
ubuntu/libdrm-nouveau2 2.4.91-2~16.04.1
ubuntu/libdrm-radeon1 2.4.91-2~16.04.1
ubuntu/libdrm2 2.4.91-2~16.04.1
ubuntu/libedit2 3.1-20150325-1ubuntu2
ubuntu/libegl1-mesa 18.0.5-0ubuntu0~16.04.1
ubuntu/libelf1 0.165-3ubuntu1.1
ubuntu/libepoxy0 1.3.1-1ubuntu0.16.04.2
ubuntu/liberror-perl 0.17-1.2
ubuntu/libevdocument3-4 3.18.2-1ubuntu4.3
ubuntu/libevview3-3 3.18.2-1ubuntu4.3
ubuntu/libexpat1-dev 2.1.0-7ubuntu0.16.04.3
ubuntu/libexpat1 2.1.0-7ubuntu0.16.04.3
ubuntu/libfdisk1 2.27.1-6ubuntu3.4
ubuntu/libffi6 3.2.1-4
ubuntu/libfftw3-double3 3.3.4-2ubuntu1
ubuntu/libflac8 1.3.1-4
ubuntu/libfontconfig1-dev 2.11.94-0ubuntu1.1
ubuntu/libfontconfig1 2.11.94-0ubuntu1.1
ubuntu/libfontenc1 1:1.1.3-1
ubuntu/libfreetype6-dev 2.6.1-0.1ubuntu2.3
ubuntu/libfreetype6 2.6.1-0.1ubuntu2.3
ubuntu/libfribidi0 0.19.7-1
ubuntu/libgbm1 18.0.5-0ubuntu0~16.04.1
ubuntu/libgcc-5-dev 5.4.0-6ubuntu1~16.04.10
ubuntu/libgcc1 1:6.0.1-0ubuntu1
ubuntu/libgconf-2-4 3.2.6-3ubuntu6
ubuntu/libgcrypt20 1.6.5-2ubuntu0.4
ubuntu/libgd3 2.1.1-4ubuntu0.16.04.8
ubuntu/libgdbm3 1.8.3-13.1
ubuntu/libgdk-pixbuf2.0-0 2.32.2-1ubuntu1.4
ubuntu/libgdk-pixbuf2.0-common 2.32.2-1ubuntu1.4
ubuntu/libgeoip1 1.6.9-1
ubuntu/libgfortran-5-dev 5.4.0-6ubuntu1~16.04.10
ubuntu/libgfortran3 5.4.0-6ubuntu1~16.04.10
ubuntu/libgif7 5.1.4-0.3~16.04
ubuntu/libgirepository-1.0-1 1.46.0-3ubuntu1
ubuntu/libgl1-mesa-dri 18.0.5-0ubuntu0~16.04.1
ubuntu/libgl1-mesa-glx 18.0.5-0ubuntu0~16.04.1
ubuntu/libglapi-mesa 18.0.5-0ubuntu0~16.04.1
ubuntu/libglib2.0-0 2.48.2-0ubuntu1
ubuntu/libglib2.0-bin 2.48.2-0ubuntu1
ubuntu/libglib2.0-data 2.48.2-0ubuntu1
ubuntu/libglib2.0-dev 2.48.2-0ubuntu1
ubuntu/libgmp10 2:6.1.0 dfsg-2
ubuntu/libgnutls30 3.4.10-4ubuntu1.4
ubuntu/libgomp1 5.4.0-6ubuntu1~16.04.10
ubuntu/libgpg-error0 1.21-2ubuntu1
ubuntu/libgpm2 1.20.4-6.1
ubuntu/libgraphite2-3 1.3.10-0ubuntu0.16.04.1
ubuntu/libgs9-common 9.18~dfsg~0-0ubuntu2.8
ubuntu/libgs9 9.18~dfsg~0-0ubuntu2.8
ubuntu/libgssapi-krb5-2 1.13.2 dfsg-5ubuntu2
ubuntu/libgssapi3-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libgstreamer-plugins-base1.0-0 1.8.3-1ubuntu0.2
ubuntu/libgstreamer1.0-0 1.8.3-1~ubuntu0.1
ubuntu/libgtk-3-0 3.18.9-1ubuntu3.3
ubuntu/libgtk-3-bin 3.18.9-1ubuntu3.3
ubuntu/libgtk-3-common 3.18.9-1ubuntu3.3
ubuntu/libgtk2.0-0 2.24.30-1ubuntu1.16.04.2
ubuntu/libgtk2.0-common 2.24.30-1ubuntu1.16.04.2
ubuntu/libgxps2 0.2.3.2-1
ubuntu/libharfbuzz-dev 1.0.1-1ubuntu0.1
ubuntu/libharfbuzz-gobject0 1.0.1-1ubuntu0.1
ubuntu/libharfbuzz-icu0 1.0.1-1ubuntu0.1
ubuntu/libharfbuzz0b 1.0.1-1ubuntu0.1
ubuntu/libhcrypto4-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libheimbase1-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libheimntlm0-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libhogweed4 3.2-1ubuntu0.16.04.1
ubuntu/libhx509-5-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libice-dev 2:1.0.9-1
ubuntu/libice6 2:1.0.9-1
ubuntu/libicu-dev 55.1-7ubuntu0.4
ubuntu/libicu55 55.1-7ubuntu0.4
ubuntu/libidn11 1.32-3ubuntu1.2
ubuntu/libijs-0.35 0.35-12
ubuntu/libini-config5 0.5.0-1
ubuntu/libipa-hbac0 1.13.4-1ubuntu1.11
ubuntu/libisccc140 1:9.10.3.dfsg.P4-8ubuntu1.10
ubuntu/libisccfg140 1:9.10.3.dfsg.P4-8ubuntu1.10
ubuntu/libisl15 0.16.1-1
ubuntu/libitm1 5.4.0-6ubuntu1~16.04.10
ubuntu/libjbig-dev 2.1-3.1
ubuntu/libjbig0 2.1-3.1
ubuntu/libjbig2dec0 0.12 20150918-1ubuntu0.1
ubuntu/libjpeg-dev 8c-2ubuntu8
ubuntu/libjpeg-turbo8-dev 1.4.2-0ubuntu3.1
ubuntu/libjpeg-turbo8 1.4.2-0ubuntu3.1
ubuntu/libjpeg8-dev 8c-2ubuntu8
ubuntu/libjpeg8 8c-2ubuntu8
ubuntu/libjson-c2 0.11-4ubuntu2
ubuntu/libjson-glib-1.0-0 1.1.2-0ubuntu1
ubuntu/libjson-glib-1.0-common 1.1.2-0ubuntu1
ubuntu/libk5crypto3 1.13.2 dfsg-5ubuntu2
ubuntu/libkeyutils1 1.5.9-8ubuntu1
ubuntu/libkmod2 22-1ubuntu5
ubuntu/libkpathsea6 2015.20160222.37495-1
ubuntu/libkrb5-26-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libkrb5-3 1.13.2 dfsg-5ubuntu2
ubuntu/libkrb5support0 1.13.2 dfsg-5ubuntu2
ubuntu/liblcms2-2 2.6-3ubuntu2
ubuntu/libldap-2.4-2 2.4.42 dfsg-2ubuntu3.3
ubuntu/libldb1 2:1.1.24-1ubuntu3
ubuntu/libllvm6.0 1:6.0-1ubuntu2~16.04.1
ubuntu/liblockfile-bin 1.09-6ubuntu1
ubuntu/liblockfile1 1.09-6ubuntu1
ubuntu/liblqr-1-0 0.4.2-2
ubuntu/liblsan0 5.4.0-6ubuntu1~16.04.10
ubuntu/libltdl7 2.4.6-0.1
ubuntu/liblwres141 1:9.10.3.dfsg.P4-8ubuntu1.10
ubuntu/liblz4-1 0.0~r131-2ubuntu2
ubuntu/liblzma-dev 5.1.1alpha 20120614-2ubuntu2
ubuntu/liblzma5 5.1.1alpha 20120614-2ubuntu2
ubuntu/liblzo2-2 2.08-1.2
ubuntu/libm17n-0 1.7.0-3
ubuntu/libmagic1 1:5.25-2ubuntu1.1
ubuntu/libmagickcore-6.q16-2 8:6.8.9.9-7ubuntu5.12
ubuntu/libmagickwand-6.q16-2 8:6.8.9.9-7ubuntu5.12
ubuntu/libmirclient9 0.26.3 16.04.20170605-0ubuntu1.1
ubuntu/libmircommon7 0.26.3 16.04.20170605-0ubuntu1.1
ubuntu/libmircore1 0.26.3 16.04.20170605-0ubuntu1.1
ubuntu/libmirprotobuf3 0.26.3 16.04.20170605-0ubuntu1.1
ubuntu/libmount1 2.27.1-6ubuntu3.4
ubuntu/libmpc3 1.0.3-1
ubuntu/libmpfr4 3.1.4-1
ubuntu/libmpx0 5.4.0-6ubuntu1~16.04.10
ubuntu/libncurses5-dev 6.0 20160213-1ubuntu1
ubuntu/libncurses5 6.0 20160213-1ubuntu1
ubuntu/libncursesw5 6.0 20160213-1ubuntu1
ubuntu/libnettle6 3.2-1ubuntu0.16.04.1
ubuntu/libnfsidmap2 0.25-5
ubuntu/libnl-3-200 3.2.27-1ubuntu0.16.04.1
ubuntu/libnl-route-3-200 3.2.27-1ubuntu0.16.04.1
ubuntu/libnspr4 2:4.13.1-0ubuntu0.16.04.1
ubuntu/libnss-sss 1.13.4-1ubuntu1.11
ubuntu/libnss3-nssdb 2:3.28.4-0ubuntu0.16.04.3
ubuntu/libnss3 2:3.28.4-0ubuntu0.16.04.3
ubuntu/libogg0 1.3.2-1
ubuntu/libopenblas-base 0.2.18-1ubuntu1
ubuntu/libopenblas-dev 0.2.18-1ubuntu1
ubuntu/libopus0 1.1.2-1ubuntu1
ubuntu/liborc-0.4-0 1:0.4.25-1
ubuntu/libotf0 0.9.13-3
ubuntu/libp11-kit0 0.23.2-5~ubuntu16.04.1
ubuntu/libpam-modules-bin 1.1.8-3.2ubuntu2.1
ubuntu/libpam-modules 1.1.8-3.2ubuntu2.1
ubuntu/libpam-pwquality 1.3.0-0ubuntu1
ubuntu/libpam-runtime 1.1.8-3.2ubuntu2.1
ubuntu/libpam-sss 1.13.4-1ubuntu1.11
ubuntu/libpam0g 1.1.8-3.2ubuntu2.1
ubuntu/libpango-1.0-0 1.38.1-1
ubuntu/libpango1.0-dev 1.38.1-1
ubuntu/libpangocairo-1.0-0 1.38.1-1
ubuntu/libpangoft2-1.0-0 1.38.1-1
ubuntu/libpangoxft-1.0-0 1.38.1-1
ubuntu/libpaper-utils 1.1.24 nmu4ubuntu1
ubuntu/libpaper1 1.1.24 nmu4ubuntu1
ubuntu/libpath-utils1 0.5.0-1
ubuntu/libpciaccess0 0.13.4-1
ubuntu/libpcre16-3 2:8.38-3.1
ubuntu/libpcre3-dev 2:8.38-3.1
ubuntu/libpcre32-3 2:8.38-3.1
ubuntu/libpcre3 2:8.38-3.1
ubuntu/libpcrecpp0v5 2:8.38-3.1
ubuntu/libpcsclite1 1.8.14-1ubuntu1.16.04.1
ubuntu/libperl5.22 5.22.1-9ubuntu0.5
ubuntu/libpixman-1-0 0.33.6-1
ubuntu/libpixman-1-dev 0.33.6-1
ubuntu/libpng12-0 1.2.54-1ubuntu1.1
ubuntu/libpng12-dev 1.2.54-1ubuntu1.1
ubuntu/libpoppler-glib8 0.41.0-0ubuntu1.7
ubuntu/libpoppler58 0.41.0-0ubuntu1.7
ubuntu/libpopt0 1.16-10
ubuntu/libpotrace0 1.13-2
ubuntu/libprocps4 2:3.3.10-4ubuntu2.3
ubuntu/libprotobuf-lite9v5 2.6.1-1.3
ubuntu/libproxy1v5 0.4.11-5ubuntu1
ubuntu/libptexenc1 2015.20160222.37495-1
ubuntu/libpthread-stubs0-dev 0.3-4
ubuntu/libpulse0 1:8.0-0ubuntu3.10
ubuntu/libpwquality-common 1.3.0-0ubuntu1
ubuntu/libpwquality1 1.3.0-0ubuntu1
ubuntu/libpython-stdlib 2.7.12-1~16.04
ubuntu/libpython2.7-minimal 2.7.12-1ubuntu0~16.04.3
ubuntu/libpython2.7-stdlib 2.7.12-1ubuntu0~16.04.3
ubuntu/libpython2.7 2.7.12-1ubuntu0~16.04.3
ubuntu/libquadmath0 5.4.0-6ubuntu1~16.04.10
ubuntu/libreadline-dev 6.3-8ubuntu2
ubuntu/libreadline6-dev 6.3-8ubuntu2
ubuntu/libreadline6 6.3-8ubuntu2
ubuntu/libref-array1 0.5.0-1
ubuntu/librest-0.7-0 0.7.93-1
ubuntu/libroken18-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/librsvg2-2 2.40.13-3
ubuntu/librsvg2-common 2.40.13-3
ubuntu/librtmp1 2.4 20151223.gitfa8646d-1ubuntu0.1
ubuntu/libsasl2-2 2.1.26.dfsg1-14build1
ubuntu/libsasl2-modules-db 2.1.26.dfsg1-14build1
ubuntu/libsasl2-modules-gssapi-mit 2.1.26.dfsg1-14build1
ubuntu/libsasl2-modules 2.1.26.dfsg1-14build1
ubuntu/libseccomp2 2.3.1-2.1ubuntu2~16.04.1
ubuntu/libsecret-1-0 0.18.4-1ubuntu2
ubuntu/libsecret-common 0.18.4-1ubuntu2
ubuntu/libselinux1 2.4-3build2
ubuntu/libsemanage-common 2.3-1build3
ubuntu/libsemanage1 2.3-1build3
ubuntu/libsensors4 1:3.4.0-2
ubuntu/libsepol1 2.4-2
ubuntu/libsigsegv2 2.10-4
ubuntu/libsm-dev 2:1.2.2-1
ubuntu/libsm6 2:1.2.2-1
ubuntu/libsmartcols1 2.27.1-6ubuntu3.4
ubuntu/libsmbclient 2:4.3.11 dfsg-0ubuntu0.16.04.13
ubuntu/libsndfile1 1.0.25-10ubuntu0.16.04.1
ubuntu/libsoup-gnome2.4-1 2.52.2-1ubuntu0.3
ubuntu/libsoup2.4-1 2.52.2-1ubuntu0.3
ubuntu/libspectre1 0.2.7-3ubuntu2
ubuntu/libsqlite3-0 3.11.0-1ubuntu1
ubuntu/libss2 1.42.13-1ubuntu1
ubuntu/libssl-dev 1.0.2g-1ubuntu4.13
ubuntu/libssl1.0.0 1.0.2g-1ubuntu4.13
ubuntu/libsss-idmap0 1.13.4-1ubuntu1.11
ubuntu/libsss-nss-idmap0 1.13.4-1ubuntu1.11
ubuntu/libsss-sudo 1.13.4-1ubuntu1.11
ubuntu/libstdc -5-dev 5.4.0-6ubuntu1~16.04.10
ubuntu/libstdc 6 5.4.0-6ubuntu1~16.04.10
ubuntu/libsynctex1 2015.20160222.37495-1
ubuntu/libsystemd0 229-4ubuntu21.2
ubuntu/libtalloc2 2.1.5-2
ubuntu/libtasn1-6 4.7-3ubuntu0.16.04.3
ubuntu/libtcl8.5 8.5.19-1
ubuntu/libtdb1 1.3.8-2
ubuntu/libtevent0 0.9.28-0ubuntu0.16.04.1
ubuntu/libtexlua52 2015.20160222.37495-1
ubuntu/libtexluajit2 2015.20160222.37495-1
ubuntu/libtext-unidecode-perl 1.27-1
ubuntu/libthai-data 0.1.24-2
ubuntu/libthai0 0.1.24-2
ubuntu/libtheora0 1.1.1 dfsg.1-8
ubuntu/libtiff5-dev 4.0.6-1ubuntu0.4
ubuntu/libtiff5 4.0.6-1ubuntu0.4
ubuntu/libtiffxx5 4.0.6-1ubuntu0.4
ubuntu/libtinfo-dev 6.0 20160213-1ubuntu1
ubuntu/libtinfo5 6.0 20160213-1ubuntu1
ubuntu/libtk8.5 8.5.19-1ubuntu1
ubuntu/libtsan0 5.4.0-6ubuntu1~16.04.10
ubuntu/libubsan0 5.4.0-6ubuntu1~16.04.10
ubuntu/libudev1 229-4ubuntu21.2
ubuntu/libusb-0.1-4 2:0.1.12-28
ubuntu/libustr-1.0-1 1.0.4-5
ubuntu/libuuid1 2.27.1-6ubuntu3.4
ubuntu/libuv1 1.8.0-1
ubuntu/libvisual-0.4-0 0.4.0-8
ubuntu/libvorbis0a 1.3.5-3ubuntu0.2
ubuntu/libvorbisenc2 1.3.5-3ubuntu0.2
ubuntu/libvpx3 1.5.0-2ubuntu1
ubuntu/libwayland-client0 1.12.0-1~ubuntu16.04.3
ubuntu/libwayland-cursor0 1.12.0-1~ubuntu16.04.3
ubuntu/libwayland-egl1-mesa 18.0.5-0ubuntu0~16.04.1
ubuntu/libwayland-server0 1.12.0-1~ubuntu16.04.3
ubuntu/libwbclient0 2:4.3.11 dfsg-0ubuntu0.16.04.13
ubuntu/libwind0-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libwrap0 7.6.q-25
ubuntu/libx11-6 2:1.6.3-1ubuntu2
ubuntu/libx11-data 2:1.6.3-1ubuntu2
ubuntu/libx11-dev 2:1.6.3-1ubuntu2
ubuntu/libx11-xcb1 2:1.6.3-1ubuntu2
ubuntu/libxau-dev 1:1.0.8-1
ubuntu/libxau6 1:1.0.8-1
ubuntu/libxaw7 2:1.0.13-1
ubuntu/libxcb-dri2-0 1.11.1-1ubuntu1
ubuntu/libxcb-dri3-0 1.11.1-1ubuntu1
ubuntu/libxcb-glx0 1.11.1-1ubuntu1
ubuntu/libxcb-present0 1.11.1-1ubuntu1
ubuntu/libxcb-render0-dev 1.11.1-1ubuntu1
ubuntu/libxcb-render0 1.11.1-1ubuntu1
ubuntu/libxcb-shm0-dev 1.11.1-1ubuntu1
ubuntu/libxcb-shm0 1.11.1-1ubuntu1
ubuntu/libxcb-sync1 1.11.1-1ubuntu1
ubuntu/libxcb-xfixes0 1.11.1-1ubuntu1
ubuntu/libxcb1-dev 1.11.1-1ubuntu1
ubuntu/libxcb1 1.11.1-1ubuntu1
ubuntu/libxcomposite1 1:0.4.4-1
ubuntu/libxcursor1 1:1.1.14-1ubuntu0.16.04.1
ubuntu/libxdamage1 1:1.1.4-2
ubuntu/libxdmcp-dev 1:1.1.2-1.1
ubuntu/libxdmcp6 1:1.1.2-1.1
ubuntu/libxext-dev 2:1.3.3-1
ubuntu/libxext6 2:1.3.3-1
ubuntu/libxfixes3 1:5.0.1-2
ubuntu/libxfont1 1:1.5.1-1ubuntu0.16.04.4
ubuntu/libxft-dev 2.3.2-1
ubuntu/libxft2 2.3.2-1
ubuntu/libxi6 2:1.7.6-1
ubuntu/libxinerama1 2:1.1.3-1
ubuntu/libxkbcommon0 0.5.0-1ubuntu2
ubuntu/libxkbfile1 1:1.0.9-0ubuntu1
ubuntu/libxml-libxml-perl 2.0123 dfsg-1ubuntu0.1
ubuntu/libxml-namespacesupport-perl 1.11-1
ubuntu/libxml-sax-base-perl 1.07-1
ubuntu/libxml-sax-perl 0.99 dfsg-2ubuntu1
ubuntu/libxml2-dev 2.9.3 dfsg1-1ubuntu0.5
ubuntu/libxml2 2.9.3 dfsg1-1ubuntu0.5
ubuntu/libxmu6 2:1.1.2-2
ubuntu/libxmuu1 2:1.1.2-2
ubuntu/libxpm4 1:3.5.11-1ubuntu0.16.04.1
ubuntu/libxrandr2 2:1.5.0-1
ubuntu/libxrender-dev 1:0.9.9-0ubuntu1
ubuntu/libxrender1 1:0.9.9-0ubuntu1
ubuntu/libxshmfence1 1.2-1
ubuntu/libxss-dev 1:1.2.2-1
ubuntu/libxss1 1:1.2.2-1
ubuntu/libxt-dev 1:1.1.5-0ubuntu1
ubuntu/libxt6 1:1.1.5-0ubuntu1
ubuntu/libxtst6 2:1.2.2-1
ubuntu/libxxf86vm1 1:1.1.4-1
ubuntu/libzzip-0-13 0.13.62-3ubuntu0.16.04.2
ubuntu/linux-libc-dev 4.4.0-130.156
ubuntu/locales 2.23-0ubuntu10
ubuntu/login 1:4.2-3.1ubuntu5.3
ubuntu/lsb-base 9.20160110ubuntu0.2
ubuntu/m17n-db 1.7.0-2
ubuntu/make 4.1-6
ubuntu/makedev 2.3.1-93ubuntu2~ubuntu16.04.1
ubuntu/mawk 1.3.3-17ubuntu2
ubuntu/mime-support 3.59ubuntu1
ubuntu/mount 2.27.1-6ubuntu3.4
ubuntu/multiarch-support 2.23-0ubuntu10
ubuntu/ncurses-base 6.0 20160213-1ubuntu1
ubuntu/ncurses-bin 6.0 20160213-1ubuntu1
ubuntu/nodejs 4.2.6~dfsg-1ubuntu4.1
ubuntu/openjdk-8-jdk-headless 8u171-b11-0ubuntu0.16.04.1
ubuntu/openjdk-8-jdk 8u171-b11-0ubuntu0.16.04.1
ubuntu/openjdk-8-jre-headless 8u171-b11-0ubuntu0.16.04.1
ubuntu/openjdk-8-jre 8u171-b11-0ubuntu0.16.04.1
ubuntu/openssh-client 1:7.2p2-4ubuntu2.4
ubuntu/openssl 1.0.2g-1ubuntu4.13
ubuntu/passwd 1:4.2-3.1ubuntu5.3
ubuntu/patch 2.7.5-1ubuntu0.16.04.1
ubuntu/perl-base 5.22.1-9ubuntu0.5
ubuntu/perl-modules-5.22 5.22.1-9ubuntu0.5
ubuntu/perl 5.22.1-9ubuntu0.5
ubuntu/pkg-config 0.29.1-0ubuntu1
ubuntu/poppler-data 0.4.7-7
ubuntu/procps 2:3.3.10-4ubuntu2.3
ubuntu/python-minimal 2.7.12-1~16.04
ubuntu/python-sss 1.13.4-1ubuntu1.11
ubuntu/python-talloc 2.1.5-2
ubuntu/python2.7-minimal 2.7.12-1ubuntu0~16.04.3
ubuntu/python2.7 2.7.12-1ubuntu0~16.04.3
ubuntu/python 2.7.12-1~16.04
ubuntu/readline-common 6.3-8ubuntu2
ubuntu/rsync 3.1.1-3ubuntu1.2
ubuntu/samba-libs 2:4.3.11 dfsg-0ubuntu0.16.04.13
ubuntu/sed 4.2.2-7
ubuntu/sensible-utils 0.0.9ubuntu0.16.04.1
ubuntu/shared-mime-info 1.5-2ubuntu0.1
ubuntu/sssd-ad-common 1.13.4-1ubuntu1.11
ubuntu/sssd-ad 1.13.4-1ubuntu1.11
ubuntu/sssd-common 1.13.4-1ubuntu1.11
ubuntu/sssd-ipa 1.13.4-1ubuntu1.11
ubuntu/sssd-krb5-common 1.13.4-1ubuntu1.11
ubuntu/sssd-krb5 1.13.4-1ubuntu1.11
ubuntu/sssd-ldap 1.13.4-1ubuntu1.11
ubuntu/sssd-proxy 1.13.4-1ubuntu1.11
ubuntu/sssd 1.13.4-1ubuntu1.11
ubuntu/systemd-sysv 229-4ubuntu21.2
ubuntu/systemd 229-4ubuntu21.2
ubuntu/sysv-rc 2.88dsf-59.3ubuntu2
ubuntu/sysvinit-utils 2.88dsf-59.3ubuntu2
ubuntu/t1utils 1.39-2
ubuntu/tar 1.28-2.1ubuntu0.1
ubuntu/tcl8.5-dev 8.5.19-1
ubuntu/tcl8.5 8.5.19-1
ubuntu/tex-common 6.04
ubuntu/texinfo 6.1.0.dfsg.1-5
ubuntu/texlive-base 2015.20160320-1ubuntu0.1
ubuntu/texlive-binaries 2015.20160222.37495-1
ubuntu/texlive-extra-utils 2015.20160320-1
ubuntu/texlive-fonts-extra 2015.20160320-1
ubuntu/texlive-fonts-recommended 2015.20160320-1ubuntu0.1
ubuntu/texlive-latex-base 2015.20160320-1ubuntu0.1
ubuntu/texlive-latex-recommended 2015.20160320-1ubuntu0.1
ubuntu/tk8.5-dev 8.5.19-1ubuntu1
ubuntu/tk8.5 8.5.19-1ubuntu1
ubuntu/ttf-adf-accanthis 0.20090423-2
ubuntu/ttf-adf-gillius 0.20090423-2
ubuntu/ttf-adf-universalis 0.20090423-2
ubuntu/tzdata 2017c-0ubuntu0.16.04
ubuntu/ubuntu-keyring 2012.05.19
ubuntu/ubuntu-mono 14.04 16.04.20180326-0ubuntu1
ubuntu/ucf 3.0036
ubuntu/unzip 6.0-20ubuntu1
ubuntu/util-linux 2.27.1-6ubuntu3.4
ubuntu/wamerican 7.1-1
ubuntu/wget 1.17.1-1ubuntu1.4
ubuntu/x11-common 1:7.7 13ubuntu3
ubuntu/x11-xkb-utils 7.7 2
ubuntu/x11proto-core-dev 7.0.31-1~ubuntu16.04.2
ubuntu/x11proto-input-dev 2.3.1-1
ubuntu/x11proto-kb-dev 1.0.7-0ubuntu1
ubuntu/x11proto-render-dev 2:0.11.1-2
ubuntu/x11proto-scrnsaver-dev 1.2.2-1
ubuntu/x11proto-xext-dev 7.3.0-1
ubuntu/xauth 1:1.0.9-1ubuntu2
ubuntu/xdg-utils 1.1.1-1ubuntu1.16.04.3
ubuntu/xfonts-base 1:1.0.4 nmu1
ubuntu/xfonts-encodings 1:1.0.4-2
ubuntu/xfonts-utils 1:7.7 3ubuntu0.16.04.2
ubuntu/xkb-data 2.16-1ubuntu1
ubuntu/xorg-sgml-doctools 1:1.11-1
ubuntu/xserver-common 2:1.18.4-0ubuntu0.7
ubuntu/xtrans-dev 1.3.5-1
ubuntu/xvfb 2:1.18.4-0ubuntu0.7
ubuntu/xz-utils 5.1.1alpha 20120614-2ubuntu2
ubuntu/zip 3.0-11
ubuntu/zlib1g-dev 1:1.2.8.dfsg-2ubuntu4.1
ubuntu/zlib1g 1:1.2.8.dfsg-2ubuntu4.1

cruzdb 0.5.6
cryptography 1.8.1
cycler 0.10.0
cyvcf2 0.7.4
funcsigs 1.0.2
Cython 0.25.2
appdirs 1.4.3
argparse 1.2.1
asn1crypto 0.22.0
backports.functools-lru-cache 1.5
certifi 2018.04.16
cffi 1.10.0
chardet 3.0.4
conda 4.3.21
datacache 1.0.0
gtfparse 1.0.7
idna 2.5
idna 2.7
intervaltree-bio 1.0.1
intervaltree 2.1.0
kiwisolver 1.0.1
matplotlib 2.2.2
memoized-property 1.0.3
mock 2.0.0
numpy 1.13.0
packaging 16.8
pandas 0.20.2
pbr 4.1.0
pip 9.0.3
progressbar33 2.4
pyOpenSSL 17.0.0
pybedtools 0.7.10
pycosat 0.6.2
pycparser 2.17
pyensembl 1.1.0
pyfaidx 0.4.9.2
pyparsing 2.1.4
pyparsing 2.2.0
pysam 0.11.2.2
python-dateutil 2.7.3
pytz 2018.5
requests 2.14.2
requests 2.19.1
scikit-learn 0.18.2
scipy 0.19.0
seaborn 0.7.1
serializable 0.1.1
setuptools 40.0.0
simplejson 3.16.0
six 1.10.0
six 1.11.0
sortedcontainers 2.0.4
subprocess32 3.5.2
tinytimer 0.0.0
typechecks 0.1.0
urllib3 1.23
wheel 0.29.0
wheel 0.31.1
wsgiref 0.1.2

python 2.7.15
python 3.6.1

US_export_policy:US_export_policy *
additional:additional 1.0
api-common:api-common 1.1.0
barclay:barclay 2.0.0
biz.aQute.bnd:biz.aQute.bndlib 3.2.0
bsh:bsh 2.0b4
ch.qos.logback:logback-classic 1.0.1
ch.qos.logback:logback-core 1.0.1
charsets:charsets *
cldrdata:cldrdata *
com.amazonaws:aws-java-sdk-core 1.11.6
com.amazonaws:aws-java-sdk-kms 1.11.6
com.amazonaws:aws-java-sdk-s3 1.11.6
com.beust:jcommander 1.12
com.esotericsoftware.kryo:kryo 2.20
com.esotericsoftware.minlog:minlog 1.2
com.esotericsoftware.reflectasm:reflectasm 1.07
com.fasterxml.jackson.core:jackson-annotations 2.6.6
com.fasterxml.jackson.core:jackson-core 2.1.3
com.fasterxml.jackson.core:jackson-core 2.6.6
com.fasterxml.jackson.core:jackson-databind 2.6.6
com.github.arara:arara 3.0
com.github.zafarkhaja:java-semver 0.9.0
com.google.api-client:google-api-client 1.21.0
com.google.apis:google-api-services-storage v1-rev108-1.22.0
com.google.auth:google-auth-library-credentials 0.7.0
com.google.auth:google-auth-library-oauth2-http 0.7.0
com.google.auto.service:auto-service 1.0-rc2
com.google.auto.value:auto-value 1.2
com.google.auto:auto-common 1.0-SNAPSHOT
com.google.cloud:google-cloud-core-http 1.2.3
com.google.cloud:google-cloud-core 1.2.3
com.google.cloud:google-cloud-storage 1.2.3
com.google.code.gson:gson 2.7
com.google.gson:gson 2.2.2
com.google.guava:guava-jdk5 17.0
com.google.guava:guava 15.0
com.google.guava:guava 19.0
com.google.guava:guava 20.0
com.google.http-client:google-http-client-appengine 1.21.0
com.google.http-client:google-http-client-jackson2 1.21.0
com.google.http-client:google-http-client-jackson 1.21.0
com.google.http-client:google-http-client 1.21.0
com.google.oauth-client:google-oauth-client 1.21.0
com.google.protobuf:protobuf-java-util 3.3.0
com.google.protobuf:protobuf-java 3.3.0
com.googlecode.jatl:jatl 0.2.2
com.googlecode.javaewah:JavaEWAH 0.7.9
com.jcraft:jsch.agentproxy.core 0.0.9
com.jcraft:jsch.agentproxy.jsch 0.0.9
com.jcraft:jsch.agentproxy.pageant 0.0.9
com.jcraft:jsch.agentproxy.sshagent 0.0.9
com.jcraft:jsch.agentproxy.usocket-jna 0.0.9
com.jcraft:jsch.agentproxy.usocket-nc 0.0.9
com.jcraft:jsch 0.1.53
com.sun.jna.platform:jna-platform 4.1.0
com.sun.jna:jna 4.1.0
com.sun:jce 1.8.0_171
com.sun:sunec 1.8.0_171
com.sun:sunjce_provider 1.8.0_171
com.sun:sunpkcs11 1.8.0_171
commons-beanutils:commons-beanutils 1.8.0
commons-cli:commons-cli 1.2
commons-codec:commons-codec 1.3
commons-codec:commons-codec 1.6
commons-collections:commons-collections 3.2.1
commons-collections:commons-collections 3.2.2
commons-io:commons-io 2.2
commons-io:commons-io 2.4
commons-lang:commons-lang 2.4
commons-lang:commons-lang 2.6
commons-logging:commons-logging 1.1.1
commons-logging:commons-logging 1.1.3
compile-transitive:compile-transitive 1.0
compile:compile 1.0
coveralls-gradle-plugin:coveralls-gradle-plugin 2.6.3
dnsns:dnsns *
dt:dt *
gatk-native-bindings:gatk-native-bindings 0.1.0-rc-1
gax:gax 1.4.2
gkl:gkl 0.8.5
google-api-services-storage-v1-rev108:google-api-services-storage-v1-rev108 1.22.0
gradle-announce:gradle-announce 3.1
gradle-antlr:gradle-antlr 3.1
gradle-base-services-groovy:gradle-base-services-groovy 3.1
gradle-base-services:gradle-base-services 3.1
gradle-build-comparison:gradle-build-comparison 3.1
gradle-build-init:gradle-build-init 3.1
gradle-cli:gradle-cli 3.1
gradle-code-quality:gradle-code-quality 3.1
gradle-composite-builds:gradle-composite-builds 3.1
gradle-core:gradle-core 3.1
gradle-dependency-management:gradle-dependency-management 3.1
gradle-diagnostics:gradle-diagnostics 3.1
gradle-docs:gradle-docs 3.1
gradle-ear:gradle-ear 3.1
gradle-git-version:gradle-git-version 0.5.1
gradle-git:gradle-git 1.4.2
gradle-ide-native:gradle-ide-native 3.1
gradle-ide-play:gradle-ide-play 3.1
gradle-ide:gradle-ide 3.1
gradle-installation-beacon:gradle-installation-beacon 3.1
gradle-ivy:gradle-ivy 3.1
gradle-jacoco:gradle-jacoco 3.1
gradle-javascript:gradle-javascript 3.1
gradle-jetty:gradle-jetty 3.1
gradle-jvm-services:gradle-jvm-services 3.1
gradle-language-groovy:gradle-language-groovy 3.1
gradle-language-java:gradle-language-java 3.1
gradle-language-jvm:gradle-language-jvm 3.1
gradle-language-native:gradle-language-native 3.1
gradle-language-scala:gradle-language-scala 3.1
gradle-logging:gradle-logging 3.1
gradle-maven:gradle-maven 3.1
gradle-messaging:gradle-messaging 3.1
gradle-model-core:gradle-model-core 3.1
gradle-model-groovy:gradle-model-groovy 3.1
gradle-native:gradle-native 3.1
gradle-open-api:gradle-open-api 3.1
gradle-osgi:gradle-osgi 3.1
gradle-platform-base:gradle-platform-base 3.1
gradle-platform-jvm:gradle-platform-jvm 3.1
gradle-platform-native:gradle-platform-native 3.1
gradle-platform-play:gradle-platform-play 3.1
gradle-plugin-development:gradle-plugin-development 3.1
gradle-plugin-use:gradle-plugin-use 3.1
gradle-plugins:gradle-plugins 3.1
gradle-process-services:gradle-process-services 3.1
gradle-publish:gradle-publish 3.1
gradle-reporting:gradle-reporting 3.1
gradle-resources-http:gradle-resources-http 3.1
gradle-resources-s3:gradle-resources-s3 3.1
gradle-resources-sftp:gradle-resources-sftp 3.1
gradle-resources:gradle-resources 3.1
gradle-scala:gradle-scala 3.1
gradle-script-kotlin:gradle-script-kotlin 0.3.2
gradle-signing:gradle-signing 3.1
gradle-task-cache-http:gradle-task-cache-http 3.1
gradle-test-kit:gradle-test-kit 3.1
gradle-testing-base:gradle-testing-base 3.1
gradle-testing-jvm:gradle-testing-jvm 3.1
gradle-testing-native:gradle-testing-native 3.1
gradle-tooling-api-builders:gradle-tooling-api-builders 3.1
gradle-tooling-api:gradle-tooling-api 3.1
gradle-ui:gradle-ui 3.1
gradle-wrapper:gradle-wrapper 2.13
gradle-wrapper:gradle-wrapper 3.1
grgit:grgit 1.5.0
groovy-all:groovy-all 2.4.7
groovy-backports-compat23:groovy-backports-compat23 2.4.4
hamcrest-core:hamcrest-core 1.3
htsjdk:htsjdk 2.16.0
icedtea-sound:icedtea-sound *
jaccess:jaccess *
jackson-core-asl:jackson-core-asl 1.9.11
jcifs:jcifs 1.3.17
jcip-annotations:jcip-annotations 1.0
jconsole:jconsole *
jdtCompilerAdapter:jdtCompilerAdapter *
joda-time:joda-time 2.8.2
joda-time:joda-time 2.9.2
json-lib:json-lib 2.3-jdk15
jsr305:jsr305 3.0.0
jsse:jsse 1.8.0_171
junit:junit 4.12
kotlin-reflect:kotlin-reflect 1.1.0-dev-2053
local_policy:local_policy *
localedata:localedata *
management-agent:management-agent *
nashorn:nashorn 1.8.0_171-8u171-b11-0ubuntu0.16.04.1-b11
native-platform-freebsd-amd64:native-platform-freebsd-amd64 0.11
native-platform-freebsd-i386:native-platform-freebsd-i386 0.11
native-platform-linux-amd64:native-platform-linux-amd64 0.11
native-platform-linux-i386:native-platform-linux-i386 0.11
native-platform-osx-amd64:native-platform-osx-amd64 0.11
native-platform-osx-i386:native-platform-osx-i386 0.11
native-platform-windows-amd64:native-platform-windows-amd64 0.11
native-platform-windows-i386:native-platform-windows-i386 0.11
native-platform:native-platform 0.11
nekohtml:nekohtml 1.9.14
nekohtml:nekohtml 1.9.16
net.sf.ezmorph:ezmorph 1.0.6
net.sf.jopt-simple:jopt-simple 5.0.3
ngs-java:ngs-java 2.9.0
org.apache.ant:ant-launcher 1.9.4
org.apache.ant:ant-launcher 1.9.6
org.apache.ant:ant 1.9.4
org.apache.ant:ant 1.9.6
org.apache.commons:commons-compress 1.4.1
org.apache.commons:commons-exec 1.1
org.apache.commons:commons-jexl 2.1.1
org.apache.commons:commons-lang3 3.1
org.apache.commons:commons-lang3 3.4
org.apache.commons:commons-math3 3.5
org.apache.geronimo.specs:geronimo-annotation_1.0_spec 1.0
org.apache.httpcomponents:httpclient 4.0.1
org.apache.httpcomponents:httpclient 4.3.6
org.apache.httpcomponents:httpclient 4.4.1
org.apache.httpcomponents:httpcore 4.0.1
org.apache.httpcomponents:httpcore 4.3.3
org.apache.httpcomponents:httpcore 4.4.4
org.apache.httpcomponents:httpmime 4.3
org.apache.logging.log4j:log4j-api 2.5
org.apache.logging.log4j:log4j-core 2.5
org.apache.maven.wagon:wagon-file 2.4
org.apache.maven.wagon:wagon-http-shared4 2.4
org.apache.maven.wagon:wagon-http 2.4
org.apache.maven.wagon:wagon-provider-api 2.4
org.apache.maven:maven-aether-provider 3.0.4
org.apache.maven:maven-artifact 3.0.4
org.apache.maven:maven-compat 3.0.4
org.apache.maven:maven-core 3.0.4
org.apache.maven:maven-model-builder 3.0.4
org.apache.maven:maven-model 3.0.4
org.apache.maven:maven-plugin-api 3.0.4
org.apache.maven:maven-repository-metadata 3.0.4
org.apache.maven:maven-settings-builder 3.0.4
org.apache.maven:maven-settings 3.0.4
org.apache.tools.ant.Main:ant-bootstrap *
org.apache.xbean:xbean-reflect 3.4
org.apache.xerces.impl.Version:xercesImpl 2.9.1
org.apache.xml.resolver.Catalog:xml-resolver 1.2
org.apache.xmlcommons.Version:xml-apis 1.3.04
org.apache:ivy 2.2.0
org.bouncycastle:bcpg-jdk15on 1.51
org.bouncycastle:bcprov-jdk15on 1.51
org.broadinstitute:google-cloud-nio-GATK4-custom-patch 0.20.4-alpha-GCS-RETRY-FIX
org.codehaus.groovy.modules.http-builder:http-builder 0.7.1
org.codehaus.plexus:plexus-classworlds 2.4
org.codehaus.plexus:plexus-component-annotations 1.5.5
org.codehaus.plexus:plexus-container-default 1.5.5
org.codehaus.plexus:plexus-interpolation 1.14
org.codehaus.plexus:plexus-utils 2.0.6
org.debian.security.UpdateCertificates:ca-certificates-java *
org.dom4j:dom4j 1.6.1
org.eclipse.jdt.core:core 3.1.1
org.eclipse.jdt:org.eclipse.jdt.annotation 1.1.0
org.eclipse.jgit:org.eclipse.jgit.ui 4.1.1.201511131810-r
org.eclipse.jgit:org.eclipse.jgit 4.1.1.201511131810-r
org.freemarker.freemarker:freemarker 2.3.23
org.fusesource.hawtjni:hawtjni-runtime 1.9
org.fusesource.jansi:jansi-linux32 1.6
org.fusesource.jansi:jansi-linux64 1.6
org.fusesource.jansi:jansi-native 1.6
org.fusesource.jansi:jansi-osx 1.6
org.fusesource.jansi:jansi-windows32 1.6
org.fusesource.jansi:jansi-windows64 1.6
org.fusesource.jansi:jansi 1.13
org.gradle.launcher.GradleMain:gradle-launcher 3.1
org.jaxen:jaxen 1.1
org.jdom2:jdom2 2.0.5
org.jetbrains.kotlin:kotlin-compiler-embeddable 1.1.0-dev-2053
org.jetbrains.kotlin:kotlin-runtime 1.1.0-dev-2053
org.jetbrains.kotlin:kotlin-stdlib 1.1.0-dev-2053
org.jetbrains.kotlin:kotlin-test-junit 1.1.0-dev-2053
org.jetbrains.kotlin:kotlin-test 1.1.0-dev-2053
org.json:json 20160810
org.mortbay.jetty:jetty-annotations 6.1.25
org.mortbay.jetty:jetty-naming 6.1.25
org.mortbay.jetty:jetty-plus 6.1.25
org.mortbay.jetty:jetty-util 6.1.25
org.mortbay.jetty:jetty 6.1.25
org.mortbay.jetty:jsp-2.1 6.1.14
org.mortbay.jetty:jsp-api-2.1 6.1.14
org.mortbay.jetty:servlet-api 2.5-20081211
org.mozilla.javascript.tools.shell.Main:rhino 1.7R3
org.mvel:mvel2 2.0.19
org.objectweb.asm.all:asm-all 5.1
org.objectweb.asm.commons:asm-commons 5.0.3
org.objectweb.asm.tree:asm-tree 5.0.3
org.objectweb.asm:asm 5.0.3
org.objenesis:objenesis 1.2
org.simpleframework:simple 4.1.21
org.slf4j:jcl-over-slf4j 1.7.10
org.slf4j:jul-to-slf4j 1.7.10
org.slf4j:log4j-over-slf4j 1.7.10
org.slf4j:slf4j-api 1.6.4
org.slf4j:slf4j-api 1.7.10
org.slf4j:slf4j-api 1.7.12
org.sonatype.aether:aether-api 1.13.1
org.sonatype.aether:aether-connector-wagon 1.13.1
org.sonatype.aether:aether-impl 1.13.1
org.sonatype.aether:aether-spi 1.13.1
org.sonatype.aether:aether-util 1.13.1
org.sonatype.plexus:plexus-cipher 1.7
org.sonatype.plexus:plexus-sec-dispatcher 1.3
org.sonatype.pmaven:pmaven-common 0.8-SNAPSHOT
org.sonatype.pmaven:pmaven-groovy 0.8-SNAPSHOT
org.testng:testng 6.3.1
org.threeten:threetenbp 1.3.3
org.tukaani.xz:xz 1.5
org.xerial.snappy.SnappyBundleActivator:snappy-java 1.1.4
org.yaml:snakeyaml 1.11
org.yaml:snakeyaml 1.6
otherLib:otherLib 1.0
picard:picard 2.18.9-SNAPSHOT
picard:picard 2.18.9-SNAPSHOT-all
project1:project1 1.0
project2:project2 1.0
project3:project3 1.0
proto-google-common-protos:proto-google-common-protos 0.1.13
proto-google-iam-v1:proto-google-iam-v1 0.1.13
providedCompile-transitive:providedCompile-transitive 1.0
providedCompile:providedCompile 1.0
providedRuntime:providedRuntime 1.0
resources:resources 1.8.0_171
rt:rt 1.8.0_171
runtime:runtime 1.0
sa-jdi:sa-jdi *
sample-plugins:sample-plugins 1.0.0
shadow:shadow 1.2.3
tools:tools *
zipfs:zipfs 1.8.0_171

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dhspence/docker-vep : 93

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