dhspence/docker-trimgalore : latest
trimgalore, cutadapt, on top of docker-genomic-analysis
Latest release: over 7 years ago - 4,607 downloads - 733 dependencies
JSONDependencies
- ubuntu/adduser 3.113 nmu3ubuntu4
- ubuntu/adwaita-icon-theme 3.18.0-2ubuntu3.1
- ubuntu/ant 1.9.6-1ubuntu1
- ubuntu/apt 1.2.24
- ubuntu/base-files 9.4ubuntu4.5
- ubuntu/base-passwd 3.5.39
- ubuntu/bash 4.3-14ubuntu1.2
- ubuntu/bc 1.06.95-9build1
- ubuntu/bind9-host 1:9.10.3.dfsg.P4-8ubuntu1.9
- ubuntu/binutils 2.26.1-1ubuntu1~16.04.5
- ubuntu/bsdutils 1:2.27.1-6ubuntu3.3
- ubuntu/build-essential 12.1ubuntu2
- ubuntu/bzip2 1.0.6-8
- ubuntu/ca-certificates-java 20160321
- ubuntu/ca-certificates 20170717~16.04.1
- ubuntu/coreutils 8.25-2ubuntu3~16.04
- ubuntu/cpp-5 5.4.0-6ubuntu1~16.04.5
- ubuntu/cpp 4:5.3.1-1ubuntu1
- ubuntu/cracklib-runtime 2.9.2-1ubuntu1
- ubuntu/curl 7.47.0-1ubuntu2.4
- ubuntu/dash 0.5.8-2.1ubuntu2
- ubuntu/dconf-gsettings-backend 0.24.0-2
- ubuntu/dconf-service 0.24.0-2
- ubuntu/debconf 1.5.58ubuntu1
- ubuntu/debianutils 4.7
- ubuntu/default-jdk-headless 2:1.8-56ubuntu2
- ubuntu/default-jdk 2:1.8-56ubuntu2
- ubuntu/default-jre-headless 2:1.8-56ubuntu2
- ubuntu/default-jre 2:1.8-56ubuntu2
- ubuntu/dh-python 2.20151103ubuntu1.1
- ubuntu/diffutils 1:3.3-3
- ubuntu/dpkg-dev 1.18.4ubuntu1.2
- ubuntu/dpkg 1.18.4ubuntu1.2
- ubuntu/e2fslibs 1.42.13-1ubuntu1
- ubuntu/e2fsprogs 1.42.13-1ubuntu1
- ubuntu/evince-common 3.18.2-1ubuntu4.2
- ubuntu/evince 3.18.2-1ubuntu4.2
- ubuntu/file 1:5.25-2ubuntu1
- ubuntu/findutils 4.6.0 git 20160126-2
- ubuntu/fontconfig-config 2.11.94-0ubuntu1.1
- ubuntu/fontconfig 2.11.94-0ubuntu1.1
- ubuntu/fonts-dejavu-core 2.35-1
- ubuntu/g -5 5.4.0-6ubuntu1~16.04.5
- ubuntu/g 4:5.3.1-1ubuntu1
- ubuntu/gawk 1:4.1.3 dfsg-0.1
- ubuntu/gcc-5-base 5.4.0-6ubuntu1~16.04.5
- ubuntu/gcc-5 5.4.0-6ubuntu1~16.04.5
- ubuntu/gcc-6-base 6.0.1-0ubuntu1
- ubuntu/gcc 4:5.3.1-1ubuntu1
- ubuntu/geoip-database 20160408-1
- ubuntu/git-man 1:2.7.4-0ubuntu1.3
- ubuntu/git 1:2.7.4-0ubuntu1.3
- ubuntu/glib-networking-common 2.48.2-1~ubuntu16.04.1
- ubuntu/glib-networking-services 2.48.2-1~ubuntu16.04.1
- ubuntu/glib-networking 2.48.2-1~ubuntu16.04.1
- ubuntu/gnupg 1.4.20-1ubuntu3.1
- ubuntu/gpgv 1.4.20-1ubuntu3.1
- ubuntu/grep 2.25-1~16.04.1
- ubuntu/gsettings-desktop-schemas 3.18.1-1ubuntu1
- ubuntu/gstreamer1.0-plugins-base 1.8.3-1ubuntu0.2
- ubuntu/gzip 1.6-4ubuntu1
- ubuntu/hicolor-icon-theme 0.15-0ubuntu1
- ubuntu/hostname 3.16ubuntu2
- ubuntu/humanity-icon-theme 0.6.10.1
- ubuntu/icu-devtools 55.1-7ubuntu0.3
- ubuntu/init-system-helpers 1.29ubuntu4
- ubuntu/init 1.29ubuntu4
- ubuntu/initscripts 2.88dsf-59.3ubuntu2
- ubuntu/insserv 1.14.0-5ubuntu3
- ubuntu/iso-codes 3.65-1
- ubuntu/java-common 0.56ubuntu2
- ubuntu/ldap-utils 2.4.42 dfsg-2ubuntu3.2
- ubuntu/less 481-2.1ubuntu0.2
- ubuntu/libacl1 2.2.52-3
- ubuntu/libapparmor1 2.10.95-0ubuntu2.7
- ubuntu/libapt-pkg5.0 1.2.24
- ubuntu/libarchive13 3.1.2-11ubuntu0.16.04.3
- ubuntu/libasan2 5.4.0-6ubuntu1~16.04.5
- ubuntu/libasn1-8-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libasound2-data 1.1.0-0ubuntu1
- ubuntu/libasound2 1.1.0-0ubuntu1
- ubuntu/libasyncns0 0.8-5build1
- ubuntu/libatk-bridge2.0-0 2.18.1-2ubuntu1
- ubuntu/libatk1.0-0 2.18.0-1
- ubuntu/libatk1.0-data 2.18.0-1
- ubuntu/libatomic1 5.4.0-6ubuntu1~16.04.5
- ubuntu/libatspi2.0-0 2.18.3-4ubuntu1
- ubuntu/libattr1 1:2.4.47-2
- ubuntu/libaudit-common 1:2.4.5-1ubuntu2
- ubuntu/libaudit1 1:2.4.5-1ubuntu2
- ubuntu/libavahi-client3 0.6.32~rc dfsg-1ubuntu2
- ubuntu/libavahi-common-data 0.6.32~rc dfsg-1ubuntu2
- ubuntu/libavahi-common3 0.6.32~rc dfsg-1ubuntu2
- ubuntu/libbasicobjects0 0.5.0-1
- ubuntu/libbind9-140 1:9.10.3.dfsg.P4-8ubuntu1.9
- ubuntu/libblkid1 2.27.1-6ubuntu3.3
- ubuntu/libboost-filesystem1.58.0 1.58.0 dfsg-5ubuntu3.1
- ubuntu/libboost-system1.58.0 1.58.0 dfsg-5ubuntu3.1
- ubuntu/libbsd0 0.8.2-1
- ubuntu/libbz2-1.0 1.0.6-8
- ubuntu/libbz2-dev 1.0.6-8
- ubuntu/libc-ares2 1.10.0-3ubuntu0.2
- ubuntu/libc-bin 2.23-0ubuntu9
- ubuntu/libc-dev-bin 2.23-0ubuntu9
- ubuntu/libc6-dev 2.23-0ubuntu9
- ubuntu/libc6 2.23-0ubuntu9
- ubuntu/libcairo-gobject2 1.14.6-1
- ubuntu/libcairo2 1.14.6-1
- ubuntu/libcap2-bin 1:2.24-12
- ubuntu/libcap2 1:2.24-12
- ubuntu/libcapnp-0.5.3 0.5.3-2ubuntu1
- ubuntu/libcc1-0 5.4.0-6ubuntu1~16.04.5
- ubuntu/libcdparanoia0 3.10.2 debian-11
- ubuntu/libcilkrts5 5.4.0-6ubuntu1~16.04.5
- ubuntu/libcollection4 0.5.0-1
- ubuntu/libcolord2 1.2.12-1ubuntu1
- ubuntu/libcomerr2 1.42.13-1ubuntu1
- ubuntu/libcrack2 2.9.2-1ubuntu1
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- ubuntu/libcryptsetup4 2:1.6.6-5ubuntu2.1
- ubuntu/libcups2 2.1.3-4ubuntu0.3
- ubuntu/libcupsfilters1 1.8.3-2ubuntu3.1
- ubuntu/libcupsimage2 2.1.3-4ubuntu0.3
- ubuntu/libcurl3-gnutls 7.47.0-1ubuntu2.4
- ubuntu/libcurl3 7.47.0-1ubuntu2.4
- ubuntu/libcurl4-openssl-dev 7.47.0-1ubuntu2.4
- ubuntu/libdatrie1 0.2.10-2
- ubuntu/libdb5.3 5.3.28-11
- ubuntu/libdbus-1-3 1.10.6-1ubuntu3.3
- ubuntu/libdconf1 0.24.0-2
- ubuntu/libdebconfclient0 0.198ubuntu1
- ubuntu/libdevmapper1.02.1 2:1.02.110-1ubuntu10
- ubuntu/libdhash1 0.5.0-1
- ubuntu/libdjvulibre-text 3.5.27.1-5
- ubuntu/libdjvulibre21 3.5.27.1-5
- ubuntu/libdns162 1:9.10.3.dfsg.P4-8ubuntu1.9
- ubuntu/libdpkg-perl 1.18.4ubuntu1.2
- ubuntu/libdrm-amdgpu1 2.4.76-1~ubuntu16.04.1
- ubuntu/libdrm-intel1 2.4.76-1~ubuntu16.04.1
- ubuntu/libdrm-nouveau2 2.4.76-1~ubuntu16.04.1
- ubuntu/libdrm-radeon1 2.4.76-1~ubuntu16.04.1
- ubuntu/libdrm2 2.4.76-1~ubuntu16.04.1
- ubuntu/libedit2 3.1-20150325-1ubuntu2
- ubuntu/libegl1-mesa 17.0.7-0ubuntu0.16.04.2
- ubuntu/libelf1 0.165-3ubuntu1
- ubuntu/libepoxy0 1.3.1-1ubuntu0.16.04.2
- ubuntu/liberror-perl 0.17-1.2
- ubuntu/libevdocument3-4 3.18.2-1ubuntu4.2
- ubuntu/libevview3-3 3.18.2-1ubuntu4.2
- ubuntu/libexpat1-dev 2.1.0-7ubuntu0.16.04.3
- ubuntu/libexpat1 2.1.0-7ubuntu0.16.04.3
- ubuntu/libfdisk1 2.27.1-6ubuntu3.3
- ubuntu/libffi6 3.2.1-4
- ubuntu/libflac8 1.3.1-4
- ubuntu/libfontconfig1 2.11.94-0ubuntu1.1
- ubuntu/libfreetype6 2.6.1-0.1ubuntu2.3
- ubuntu/libgbm1 17.0.7-0ubuntu0.16.04.2
- ubuntu/libgcc-5-dev 5.4.0-6ubuntu1~16.04.5
- ubuntu/libgcc1 1:6.0.1-0ubuntu1
- ubuntu/libgcrypt20 1.6.5-2ubuntu0.3
- ubuntu/libgdbm3 1.8.3-13.1
- ubuntu/libgdk-pixbuf2.0-0 2.32.2-1ubuntu1.3
- ubuntu/libgdk-pixbuf2.0-common 2.32.2-1ubuntu1.3
- ubuntu/libgeoip1 1.6.9-1
- ubuntu/libgif7 5.1.4-0.3~16.04
- ubuntu/libgl1-mesa-dri 17.0.7-0ubuntu0.16.04.2
- ubuntu/libgl1-mesa-glx 17.0.7-0ubuntu0.16.04.2
- ubuntu/libglapi-mesa 17.0.7-0ubuntu0.16.04.2
- ubuntu/libglib2.0-0 2.48.2-0ubuntu1
- ubuntu/libgmp10 2:6.1.0 dfsg-2
- ubuntu/libgnutls30 3.4.10-4ubuntu1.4
- ubuntu/libgomp1 5.4.0-6ubuntu1~16.04.5
- ubuntu/libgpg-error0 1.21-2ubuntu1
- ubuntu/libgraphite2-3 1.3.10-0ubuntu0.16.04.1
- ubuntu/libgs9-common 9.18~dfsg~0-0ubuntu2.7
- ubuntu/libgs9 9.18~dfsg~0-0ubuntu2.7
- ubuntu/libgssapi-krb5-2 1.13.2 dfsg-5ubuntu2
- ubuntu/libgssapi3-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libgstreamer-plugins-base1.0-0 1.8.3-1ubuntu0.2
- ubuntu/libgstreamer1.0-0 1.8.3-1~ubuntu0.1
- ubuntu/libgtk-3-0 3.18.9-1ubuntu3.3
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- ubuntu/libgtk2.0-0 2.24.30-1ubuntu1.16.04.2
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- ubuntu/libgxps2 0.2.3.2-1
- ubuntu/libharfbuzz0b 1.0.1-1ubuntu0.1
- ubuntu/libhcrypto4-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libheimbase1-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libheimntlm0-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libhogweed4 3.2-1ubuntu0.16.04.1
- ubuntu/libhx509-5-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libicu-dev 55.1-7ubuntu0.3
- ubuntu/libicu55 55.1-7ubuntu0.3
- ubuntu/libidn11 1.32-3ubuntu1.2
- ubuntu/libijs-0.35 0.35-12
- ubuntu/libini-config5 0.5.0-1
- ubuntu/libipa-hbac0 1.13.4-1ubuntu1.9
- ubuntu/libisc160 1:9.10.3.dfsg.P4-8ubuntu1.9
- ubuntu/libisccc140 1:9.10.3.dfsg.P4-8ubuntu1.9
- ubuntu/libisccfg140 1:9.10.3.dfsg.P4-8ubuntu1.9
- ubuntu/libisl15 0.16.1-1
- ubuntu/libitm1 5.4.0-6ubuntu1~16.04.5
- ubuntu/libjbig0 2.1-3.1
- ubuntu/libjbig2dec0 0.12 20150918-1ubuntu0.1
- ubuntu/libjpeg-turbo8 1.4.2-0ubuntu3
- ubuntu/libjpeg8 8c-2ubuntu8
- ubuntu/libjson-c2 0.11-4ubuntu2
- ubuntu/libjson-glib-1.0-0 1.1.2-0ubuntu1
- ubuntu/libjson-glib-1.0-common 1.1.2-0ubuntu1
- ubuntu/libk5crypto3 1.13.2 dfsg-5ubuntu2
- ubuntu/libkeyutils1 1.5.9-8ubuntu1
- ubuntu/libkmod2 22-1ubuntu5
- ubuntu/libkpathsea6 2015.20160222.37495-1
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- ubuntu/multiarch-support 2.23-0ubuntu9
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- ubuntu/python3-virtualenv 15.0.1 ds-3ubuntu1
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- ubuntu/systemd 229-4ubuntu21
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- ubuntu/ubuntu-keyring 2012.05.19
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- ubuntu/ucf 3.0036
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- ubuntu/virtualenv 15.0.1 ds-3ubuntu1
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- ubuntu/xz-utils 5.1.1alpha 20120614-2ubuntu2
- ubuntu/zip 3.0-11
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- ubuntu/zlib1g 1:1.2.8.dfsg-2ubuntu4.1
- US_export_policy:US_export_policy *
- additional:additional 1.0
- barclay:barclay 1.1.0
- biz.aQute.bnd:biz.aQute.bndlib 3.2.0
- bsh:bsh 2.0b4
- charsets:charsets *
- cisd-jhdf5:cisd-jhdf5 *
- cldrdata:cldrdata *
- com.amazonaws:aws-java-sdk-core 1.11.6
- com.amazonaws:aws-java-sdk-kms 1.11.6
- com.amazonaws:aws-java-sdk-s3 1.11.6
- com.beust:jcommander 1.12
- com.esotericsoftware.kryo:kryo 2.20
- com.esotericsoftware.minlog:minlog 1.2
- com.esotericsoftware.reflectasm:reflectasm 1.07
- com.fasterxml.jackson.core:jackson-annotations 2.6.6
- com.fasterxml.jackson.core:jackson-core 2.6.6
- com.fasterxml.jackson.core:jackson-databind 2.6.6
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- com.google.code.gson:gson 2.7
- com.google.gson:gson 2.2.2
- com.google.guava:guava-jdk5 17.0
- com.google.guava:guava 15.0
- com.google.guava:guava 19.0
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- com.googlecode.javaewah:JavaEWAH 0.7.9
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- commons-beanutils:commons-beanutils 1.8.0
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- commons-collections:commons-collections 3.2.2
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- commons-io:commons-io 2.2
- commons-io:commons-io 2.4
- commons-lang:commons-lang 2.4
- commons-lang:commons-lang 2.6
- commons-logging:commons-logging 1.1.1
- commons-logging:commons-logging 1.1.3
- compile-transitive:compile-transitive 1.0
- compile:compile 1.0
- coveralls-gradle-plugin:coveralls-gradle-plugin 2.6.3
- dnsns:dnsns *
- dt:dt *
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- gradle-announce:gradle-announce 3.1
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- gradle-base-services:gradle-base-services 3.1
- gradle-build-comparison:gradle-build-comparison 3.1
- gradle-build-init:gradle-build-init 3.1
- gradle-cli:gradle-cli 3.1
- gradle-code-quality:gradle-code-quality 3.1
- gradle-composite-builds:gradle-composite-builds 3.1
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- gradle-diagnostics:gradle-diagnostics 3.1
- gradle-docs:gradle-docs 3.1
- gradle-ear:gradle-ear 3.1
- gradle-git-version:gradle-git-version 0.5.1
- gradle-git:gradle-git 1.4.2
- gradle-ide-native:gradle-ide-native 3.1
- gradle-ide-play:gradle-ide-play 3.1
- gradle-ide:gradle-ide 3.1
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- gradle-jetty:gradle-jetty 3.1
- gradle-jvm-services:gradle-jvm-services 3.1
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- gradle-language-java:gradle-language-java 3.1
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- gradle-language-native:gradle-language-native 3.1
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- gradle-maven:gradle-maven 3.1
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- gradle-model-core:gradle-model-core 3.1
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- gradle-plugin-development:gradle-plugin-development 3.1
- gradle-plugin-use:gradle-plugin-use 3.1
- gradle-plugins:gradle-plugins 3.1
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- gradle-signing:gradle-signing 3.1
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- gradle-ui:gradle-ui 3.1
- gradle-wrapper:gradle-wrapper 2.13
- gradle-wrapper:gradle-wrapper 3.1
- grgit:grgit 1.5.0
- hamcrest-core:hamcrest-core 1.3
- htsjdk:htsjdk 2.11.0
- icedtea-sound:icedtea-sound *
- jaccess:jaccess *
- jbzip2:jbzip2 0.9
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- jcip-annotations:jcip-annotations 1.0
- jconsole:jconsole *
- jdtCompilerAdapter:jdtCompilerAdapter *
- joda-time:joda-time 2.8.2
- json-lib:json-lib 2.3-jdk15
- jsse:jsse 1.8.0_191
- junit:junit 4.12
- kotlin-reflect:kotlin-reflect 1.1.0-dev-2053
- local_policy:local_policy *
- localedata:localedata *
- management-agent:management-agent *
- nashorn:nashorn 1.8.0_191-8u191-b12-0ubuntu0.16.04.1-b12
- native-platform-freebsd-amd64:native-platform-freebsd-amd64 0.11
- native-platform-freebsd-i386:native-platform-freebsd-i386 0.11
- native-platform-linux-amd64:native-platform-linux-amd64 0.11
- native-platform-linux-i386:native-platform-linux-i386 0.11
- native-platform-osx-amd64:native-platform-osx-amd64 0.11
- native-platform-osx-i386:native-platform-osx-i386 0.11
- native-platform-windows-amd64:native-platform-windows-amd64 0.11
- native-platform-windows-i386:native-platform-windows-i386 0.11
- native-platform:native-platform 0.11
- nekohtml:nekohtml 1.9.14
- nekohtml:nekohtml 1.9.16
- net.sf.ezmorph:ezmorph 1.0.6
- net.sf.jopt-simple:jopt-simple 5.0.3
- ngs-java:ngs-java 1.2.4
- org.apache.ant:ant-launcher 1.9.4
- org.apache.ant:ant-launcher 1.9.6
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- org.apache.ant:ant 1.9.6
- org.apache.commons:commons-compress 1.4.1
- org.apache.commons:commons-jexl 2.1.1
- org.apache.commons:commons-lang3 3.4
- org.apache.geronimo.specs:geronimo-annotation_1.0_spec 1.0
- org.apache.httpcomponents:httpclient 4.3.6
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- org.apache.httpcomponents:httpcore 4.4.4
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- org.apache.tools.ant.Main:ant-bootstrap *
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- org.bouncycastle:bcpg-jdk15on 1.51
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- org.codehaus.plexus:plexus-classworlds 2.4
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- org.codehaus.plexus:plexus-interpolation 1.14
- org.codehaus.plexus:plexus-utils 2.0.6
- org.debian.security.UpdateCertificates:ca-certificates-java *
- org.dom4j:dom4j 1.6.1
- org.eclipse.jdt.core:core 3.1.1
- org.eclipse.jdt:org.eclipse.jdt.annotation 1.1.0
- org.eclipse.jgit:org.eclipse.jgit.ui 4.1.1.201511131810-r
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- org.fusesource.hawtjni:hawtjni-runtime 1.9
- org.fusesource.jansi:jansi-linux32 1.6
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- org.fusesource.jansi:jansi-native 1.6
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- org.fusesource.jansi:jansi-windows32 1.6
- org.fusesource.jansi:jansi-windows64 1.6
- org.fusesource.jansi:jansi 1.13
- org.gradle.launcher.GradleMain:gradle-launcher 3.1
- org.jaxen:jaxen 1.1
- org.jdom2:jdom2 2.0.5
- org.jetbrains.kotlin:kotlin-compiler-embeddable 1.1.0-dev-2053
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- otherLib:otherLib 1.0
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- picard:picard 2.12.1-SNAPSHOT-all
- project1:project1 1.0
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- providedCompile:providedCompile 1.0
- providedRuntime:providedRuntime 1.0
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- runtime:runtime 1.0
- sa-jdi:sa-jdi *
- sam:sam 1.103
- sample-plugins:sample-plugins 1.0.0
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- tools:tools *
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