dhspence/docker-ichor : latest
Latest release: almost 8 years ago - 270 downloads - 961 dependencies
JSONDependencies
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.42.1
- BH 1.66.0-1
- Biobase 2.40.0
- BiocGenerics 0.26.0
- BiocInstaller 1.30.0
- DBI 1.0.0
- GenomeInfoDb 1.16.0
- GenomeInfoDbData 1.1.0
- HMMcopy 1.22.0
- IRanges 2.14.10
- R6 2.2.2
- RColorBrewer 1.1-2
- RCurl 1.95-4.11
- RSQLite 2.1.1
- Rcpp 0.12.18
- S4Vectors 0.18.3
- XML 3.98-1.13
- annotate 1.58.0
- assertthat 0.2.0
- base 3.5.0
- bit64 0.9-7
- bit 1.1-14
- bitops 1.0-6
- blob 1.1.1
- compiler 3.5.0
- curl 3.2
- datasets 3.5.0
- devtools 1.13.6
- digest 0.6.15
- docopt 0.4.5
- geneplotter 1.58.0
- getopt 1.20.2
- git2r 0.23.0
- glue 1.3.0
- grDevices 3.5.0
- graphics 3.5.0
- grid 3.5.0
- httr 1.3.1
- ichorCNA 0.1.0
- jsonlite 1.5
- lattice 0.20-35
- littler 0.3.3
- magrittr 1.5
- memoise 1.1.0
- methods 3.5.0
- mime 0.5
- openssl 1.0.2
- optparse 1.6.0
- org.testing.db 0.1
- parallel 3.5.0
- pkgconfig 2.0.1
- plogr 0.2.0
- plyr 1.8.4
- splines 3.5.0
- stats4 3.5.0
- prettyunits 1.0.2
- rstudioapi 0.7
- stats 3.5.0
- stringi 1.2.4
- stringr 1.3.1
- tcltk 3.5.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- tools 3.5.0
- translations 3.5.0
- utils 3.5.0
- whisker 0.3-2
- withr 2.1.2
- xtable 1.8-2
- ubuntu/adduser 3.113 nmu3ubuntu4
- ubuntu/adwaita-icon-theme 3.18.0-2ubuntu3.1
- ubuntu/ant 1.9.6-1ubuntu1
- ubuntu/apt 1.2.24
- ubuntu/aptitude-common 0.7.4-2ubuntu2
- ubuntu/aptitude 0.7.4-2ubuntu2
- ubuntu/base-files 9.4ubuntu4.5
- ubuntu/base-passwd 3.5.39
- ubuntu/bash 4.3-14ubuntu1.2
- ubuntu/bc 1.06.95-9build1
- ubuntu/bind9-host 1:9.10.3.dfsg.P4-8ubuntu1.9
- ubuntu/binutils 2.26.1-1ubuntu1~16.04.5
- ubuntu/bsdutils 1:2.27.1-6ubuntu3.3
- ubuntu/build-essential 12.1ubuntu2
- ubuntu/bzip2 1.0.6-8
- ubuntu/ca-certificates-java 20160321
- ubuntu/ca-certificates 20170717~16.04.1
- ubuntu/cmake-data 3.5.1-1ubuntu3
- ubuntu/cmake 3.5.1-1ubuntu3
- ubuntu/coreutils 8.25-2ubuntu3~16.04
- ubuntu/cpp-5 5.4.0-6ubuntu1~16.04.10
- ubuntu/cpp 4:5.3.1-1ubuntu1
- ubuntu/cracklib-runtime 2.9.2-1ubuntu1
- ubuntu/curl 7.47.0-1ubuntu2.4
- ubuntu/dash 0.5.8-2.1ubuntu2
- ubuntu/dconf-gsettings-backend 0.24.0-2
- ubuntu/dconf-service 0.24.0-2
- ubuntu/debconf 1.5.58ubuntu1
- ubuntu/debianutils 4.7
- ubuntu/default-jdk-headless 2:1.8-56ubuntu2
- ubuntu/default-jdk 2:1.8-56ubuntu2
- ubuntu/default-jre-headless 2:1.8-56ubuntu2
- ubuntu/default-jre 2:1.8-56ubuntu2
- ubuntu/dh-python 2.20151103ubuntu1.1
- ubuntu/diffutils 1:3.3-3
- ubuntu/dpkg-dev 1.18.4ubuntu1.2
- ubuntu/dpkg 1.18.4ubuntu1.2
- ubuntu/e2fslibs 1.42.13-1ubuntu1
- ubuntu/e2fsprogs 1.42.13-1ubuntu1
- ubuntu/evince-common 3.18.2-1ubuntu4.2
- ubuntu/evince 3.18.2-1ubuntu4.2
- ubuntu/f2c 20100827-2
- ubuntu/file 1:5.25-2ubuntu1
- ubuntu/findutils 4.6.0 git 20160126-2
- ubuntu/fontconfig-config 2.11.94-0ubuntu1.1
- ubuntu/fontconfig 2.11.94-0ubuntu1.1
- ubuntu/fonts-dejavu-core 2.35-1
- ubuntu/fort77 1.15-10
- ubuntu/g -5 5.4.0-6ubuntu1~16.04.10
- ubuntu/g 4:5.3.1-1ubuntu1
- ubuntu/gawk 1:4.1.3 dfsg-0.1
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- ubuntu/gcc-5 5.4.0-6ubuntu1~16.04.10
- ubuntu/gcc-6-base 6.0.1-0ubuntu1
- ubuntu/gcc-multilib 4:5.3.1-1ubuntu1
- ubuntu/gcc 4:5.3.1-1ubuntu1
- ubuntu/geoip-database 20160408-1
- ubuntu/gfortran-5 5.4.0-6ubuntu1~16.04.10
- ubuntu/gfortran 4:5.3.1-1ubuntu1
- ubuntu/git-man 1:2.7.4-0ubuntu1.3
- ubuntu/git 1:2.7.4-0ubuntu1.3
- ubuntu/glib-networking-common 2.48.2-1~ubuntu16.04.1
- ubuntu/glib-networking-services 2.48.2-1~ubuntu16.04.1
- ubuntu/glib-networking 2.48.2-1~ubuntu16.04.1
- ubuntu/gnupg 1.4.20-1ubuntu3.1
- ubuntu/gobjc -5 5.4.0-6ubuntu1~16.04.10
- ubuntu/gobjc 4:5.3.1-1ubuntu1
- ubuntu/gobjc-5 5.4.0-6ubuntu1~16.04.10
- ubuntu/gpgv 1.4.20-1ubuntu3.1
- ubuntu/grep 2.25-1~16.04.1
- ubuntu/gsettings-desktop-schemas 3.18.1-1ubuntu1
- ubuntu/gstreamer1.0-plugins-base 1.8.3-1ubuntu0.2
- ubuntu/gzip 1.6-4ubuntu1
- ubuntu/hicolor-icon-theme 0.15-0ubuntu1
- ubuntu/hostname 3.16ubuntu2
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- ubuntu/icu-devtools 55.1-7ubuntu0.3
- ubuntu/init-system-helpers 1.29ubuntu4
- ubuntu/init 1.29ubuntu4
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- ubuntu/insserv 1.14.0-5ubuntu3
- ubuntu/iso-codes 3.65-1
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- ubuntu/less 481-2.1ubuntu0.2
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- ubuntu/libacl1 2.2.52-3
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- ubuntu/libasound2-data 1.1.0-0ubuntu1
- ubuntu/libasound2 1.1.0-0ubuntu1
- ubuntu/libasyncns0 0.8-5build1
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- ubuntu/libatk1.0-data 2.18.0-1
- ubuntu/libatomic1 5.4.0-6ubuntu1~16.04.10
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- ubuntu/libattr1 1:2.4.47-2
- ubuntu/libaudit-common 1:2.4.5-1ubuntu2
- ubuntu/libaudit1 1:2.4.5-1ubuntu2
- ubuntu/libavahi-client3 0.6.32~rc dfsg-1ubuntu2
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- ubuntu/libavahi-common3 0.6.32~rc dfsg-1ubuntu2
- ubuntu/libbasicobjects0 0.5.0-1
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- ubuntu/libblas-common 3.6.0-2ubuntu2
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- ubuntu/libblkid1 2.27.1-6ubuntu3.3
- ubuntu/libboost-filesystem1.58.0 1.58.0 dfsg-5ubuntu3.1
- ubuntu/libboost-iostreams1.58.0 1.58.0 dfsg-5ubuntu3.1
- ubuntu/libboost-system1.58.0 1.58.0 dfsg-5ubuntu3.1
- ubuntu/libbsd0 0.8.2-1
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- org.apache.commons:commons-compress 1.4.1
- org.apache.commons:commons-jexl 2.1.1
- org.apache.commons:commons-lang3 3.4
- org.apache.geronimo.specs:geronimo-annotation_1.0_spec 1.0
- org.apache.httpcomponents:httpclient 4.3.6
- org.apache.httpcomponents:httpclient 4.4.1
- org.apache.httpcomponents:httpcore 4.3.3
- org.apache.httpcomponents:httpcore 4.4.4
- org.apache.httpcomponents:httpmime 4.3
- org.apache.logging.log4j:log4j-api 2.5
- org.apache.logging.log4j:log4j-core 2.5
- org.apache.maven.wagon:wagon-file 2.4
- org.apache.maven.wagon:wagon-http-shared4 2.4
- org.apache.maven.wagon:wagon-http 2.4
- org.apache.maven.wagon:wagon-provider-api 2.4
- org.apache.maven:maven-aether-provider 3.0.4
- org.apache.maven:maven-artifact 3.0.4
- org.apache.maven:maven-compat 3.0.4
- org.apache.maven:maven-core 3.0.4
- org.apache.maven:maven-model-builder 3.0.4
- org.apache.maven:maven-model 3.0.4
- org.apache.maven:maven-plugin-api 3.0.4
- org.apache.maven:maven-repository-metadata 3.0.4
- org.apache.maven:maven-settings-builder 3.0.4
- org.apache.maven:maven-settings 3.0.4
- org.apache.tools.ant.Main:ant-bootstrap *
- org.apache.xbean:xbean-reflect 3.4
- org.apache.xerces.impl.Version:xercesImpl 2.9.1
- org.apache.xml.resolver.Catalog:xml-resolver 1.2
- org.apache.xmlcommons.Version:xml-apis 1.3.04
- org.apache:ivy 2.2.0
- org.bouncycastle:bcpg-jdk15on 1.51
- org.bouncycastle:bcprov-jdk15on 1.51
- org.codehaus.groovy.modules.http-builder:http-builder 0.7.1
- org.codehaus.groovy:groovy-all 2.4.7
- org.codehaus.groovy:groovy-backports-compat23 2.4.4
- org.codehaus.plexus:plexus-classworlds 2.4
- org.codehaus.plexus:plexus-component-annotations 1.5.5
- org.codehaus.plexus:plexus-container-default 1.5.5
- org.codehaus.plexus:plexus-interpolation 1.14
- org.codehaus.plexus:plexus-utils 2.0.6
- org.debian.security.UpdateCertificates:ca-certificates-java *
- org.dom4j:dom4j 1.6.1
- org.eclipse.jdt.core:core 3.1.1
- org.eclipse.jdt:org.eclipse.jdt.annotation 1.1.0
- org.eclipse.jgit:org.eclipse.jgit.ui 4.1.1.201511131810-r
- org.eclipse.jgit:org.eclipse.jgit 4.1.1.201511131810-r
- org.fusesource.hawtjni:hawtjni-runtime 1.9
- org.fusesource.jansi:jansi-linux32 1.6
- org.fusesource.jansi:jansi-linux64 1.6
- org.fusesource.jansi:jansi-native 1.6
- org.fusesource.jansi:jansi-osx 1.6
- org.fusesource.jansi:jansi-windows32 1.6
- org.fusesource.jansi:jansi-windows64 1.6
- org.fusesource.jansi:jansi 1.13
- org.gradle.launcher.GradleMain:gradle-launcher 3.1
- org.jaxen:jaxen 1.1
- org.jdom2:jdom2 2.0.5
- org.jetbrains.kotlin:kotlin-compiler-embeddable 1.1.0-dev-2053
- org.jetbrains.kotlin:kotlin-runtime 1.1.0-dev-2053
- org.jetbrains.kotlin:kotlin-stdlib 1.1.0-dev-2053
- org.jetbrains.kotlin:kotlin-test-junit 1.1.0-dev-2053
- org.jetbrains.kotlin:kotlin-test 1.1.0-dev-2053
- org.mortbay.jetty:jetty-annotations 6.1.25
- org.mortbay.jetty:jetty-naming 6.1.25
- org.mortbay.jetty:jetty-plus 6.1.25
- org.mortbay.jetty:jetty-util 6.1.25
- org.mortbay.jetty:jetty 6.1.25
- org.mortbay.jetty:jsp-2.1 6.1.14
- org.mortbay.jetty:jsp-api-2.1 6.1.14
- org.mortbay.jetty:servlet-api 2.5-20081211
- org.mozilla.javascript.tools.shell.Main:rhino 1.7R3
- org.objectweb.asm.all:asm-all 5.1
- org.objectweb.asm.commons:asm-commons 5.0.3
- org.objectweb.asm.tree:asm-tree 5.0.3
- org.objectweb.asm:asm 5.0.3
- org.objenesis:objenesis 1.2
- org.simpleframework:simple 4.1.21
- org.slf4j:jcl-over-slf4j 1.7.10
- org.slf4j:jul-to-slf4j 1.7.10
- org.slf4j:log4j-over-slf4j 1.7.10
- org.slf4j:slf4j-api 1.7.10
- org.slf4j:slf4j-api 1.7.12
- org.sonatype.aether:aether-api 1.13.1
- org.sonatype.aether:aether-connector-wagon 1.13.1
- org.sonatype.aether:aether-impl 1.13.1
- org.sonatype.aether:aether-spi 1.13.1
- org.sonatype.aether:aether-util 1.13.1
- org.sonatype.plexus:plexus-cipher 1.7
- org.sonatype.plexus:plexus-sec-dispatcher 1.3
- org.sonatype.pmaven:pmaven-common 0.8-SNAPSHOT
- org.sonatype.pmaven:pmaven-groovy 0.8-SNAPSHOT
- org.testng:testng 6.3.1
- org.tukaani.xz:xz 1.5
- org.xerial.snappy:snappy-java 1.0.3-rc3
- org.yaml:snakeyaml 1.6
- otherLib:otherLib 1.0
- picard:picard 2.12.1-SNAPSHOT
- picard:picard 2.12.1-SNAPSHOT-all
- project1:project1 1.0
- project2:project2 1.0
- project3:project3 1.0
- providedCompile-transitive:providedCompile-transitive 1.0
- providedCompile:providedCompile 1.0
- providedRuntime:providedRuntime 1.0
- resources:resources 1.8.0_151
- rt:rt 1.8.0_151
- runtime:runtime 1.0
- sa-jdi:sa-jdi *
- sample-plugins:sample-plugins 1.0.0
- shadow:shadow 1.2.3
- tools:tools *
- zipfs:zipfs 1.8.0_151