dhspence/docker-homer : latest

docker with chip-seq tool homer

Latest release: over 7 years ago - 782 downloads - 606 dependencies

JSON

Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.42.1
BH 1.66.0-1
Biobase 2.40.0
BiocGenerics 0.26.0
BiocParallel 1.14.2
DBI 1.0.0
DESeq2 1.20.0
DelayedArray 0.6.6
Formula 1.2-3
GenomeInfoDb 1.16.0
GenomeInfoDbData 1.1.0
GenomicRanges 1.32.7
Hmisc 4.1-1
IRanges 2.14.12
IRdisplay 0.7.0
IRkernel 0.8.14
KernSmooth 2.23-15
MASS 7.3-50
Matrix 1.2-14
ModelMetrics 1.1.0
R6 2.2.2
RColorBrewer 1.1-2
RCurl 1.95-4.11
RSQLite 2.1.1
Rcpp 1.0.0
RcppArmadillo 0.9.100.5.0
RcppRoll 0.3.0
S4Vectors 0.18.3
SQUAREM 2017.10-1
SummarizedExperiment 1.10.1
TTR 0.23-4
XML 3.98-1.16
XVector 0.20.0
acepack 1.4.1
annotate 1.58.0
assertthat 0.2.0
backports 1.1.2
base64enc 0.1-3
base 3.5.1
bindr 0.1.1
bindrcpp 0.2.2
bit64 0.9-7
bit 1.1-12
bitops 1.0-6
blob 1.1.1
boot 1.3-20
broom 0.5.0
callr 3.0.0
caret 6.0-80
cellranger 1.1.0
checkmate 1.8.5
class 7.3-14
cli 1.0.1
clipr 0.4.1
cluster 2.0.7-1
codetools 0.2-15
colorspace 1.3-2
compiler 3.5.1
crayon 1.3.4
curl 3.2
data.table 1.11.8
datasets 3.5.1
dbplyr 1.2.2
digest 0.6.18
dplyr 0.7.8
edgeR 3.22.5
evaluate 0.11
fansi 0.3.0
forcats 0.3.0
foreach 1.4.4
foreign 0.8-71
formatR 1.5
futile.logger 1.4.3
futile.options 1.0.1
genefilter 1.62.0
geneplotter 1.58.0
generics 0.0.2
ggplot2 3.1.0
gistr 0.4.2
glmnet 2.0-16
glue 1.3.0
gower 0.1.2
grDevices 3.5.1
graphics 3.5.1
grid 3.5.1
gridExtra 2.3
gtable 0.2.0
haven 1.1.2
hexbin 1.27.2
highr 0.7
hms 0.4.2
htmlTable 1.12
htmltools 0.3.6
htmlwidgets 1.2
httpuv 1.4.5
httr 1.3.1
ipred 0.9-7
iterators 1.0.10
jsonlite 1.6
knitr 1.20
labeling 0.3
lambda.r 1.2.3
later 0.7.3
lattice 0.20-35
latticeExtra 0.6-28
lava 1.6.3
lazyeval 0.2.1
limma 3.36.5
linkXTS 1.0
locfit 1.5-9.1
lubridate 1.7.4
magrittr 1.5
maps 3.3.0
markdown 0.8
matrixStats 0.54.0
memoise 1.1.0
methods 3.5.1
mgcv 1.8-24
mime 0.5
modelr 0.1.2
munsell 0.5.0
nlme 3.1-137
nnet 7.3-12
numDeriv 2016.8-1
openssl 1.0.2
org.testing.db 0.1
parallel 3.5.1
pbdZMQ 0.3-3
pillar 1.3.0
pkgconfig 2.0.2
plogr 0.2.0
plyr 1.8.4
prettyunits 1.0.2
processx 3.2.0
prodlim 2018.04.18
promises 1.0.1
pryr 0.1.4
ps 1.1.0
purrr 0.2.5
quantmod 0.4-13
randomForest 4.6-14
rbokeh 0.5.0
readr 1.3.0
readxl 1.1.0
recipes 0.1.4
rematch 1.0.1
repr 0.18
reprex 0.2.0
reshape2 1.4.3
rlang 0.3.0.1
rmarkdown 1.10
rpart 4.1-13
rprojroot 1.3-2
rstudioapi 0.8
rvest 0.3.2
scales 1.0.0
selectr 0.4-1
shiny 1.2.0
snow 0.4-3
sourcetools 0.1.7
spatial 7.3-11
splines 3.5.1
stats4 3.5.1
stats 3.5.1
stringi 1.2.4
stringr 1.3.1
survival 2.42-6
tcltk 3.5.1
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
tibble 1.4.2
tidyr 0.8.2
tidyselect 0.2.5
tidyverse 1.2.1
timeDate 3043.102
tinytex 0.8
tools 3.5.1
translations 3.5.1
utf8 1.1.4
utils 3.5.1
uuid 0.1-2
viridis 0.5.1
viridisLite 0.3.0
whisker 0.3-2
withr 2.1.2
xfun 0.3
xml2 1.2.0
xtable 1.8-3
xts 0.11-1
yaml 2.2.0
zlibbioc 1.26.0
zoo 1.8-3

ubuntu/adduser 3.113 nmu3ubuntu4
ubuntu/apt 1.2.29
ubuntu/base-files 9.4ubuntu4.7
ubuntu/base-passwd 3.5.39
ubuntu/bash-completion 1:2.1-4.2ubuntu1.1
ubuntu/bash 4.3-14ubuntu1.2
ubuntu/bc 1.06.95-9build1
ubuntu/bind9-host 1:9.10.3.dfsg.P4-8ubuntu1.11
ubuntu/binutils 2.26.1-1ubuntu1~16.04.7
ubuntu/bsdutils 1:2.27.1-6ubuntu3.6
ubuntu/build-essential 12.1ubuntu2
ubuntu/bzip2 1.0.6-8
ubuntu/ca-certificates 20170717~16.04.1
ubuntu/coreutils 8.25-2ubuntu3~16.04
ubuntu/cpp-5 5.4.0-6ubuntu1~16.04.10
ubuntu/cpp 4:5.3.1-1ubuntu1
ubuntu/cracklib-runtime 2.9.2-1ubuntu1
ubuntu/curl 7.47.0-1ubuntu2.11
ubuntu/dash 0.5.8-2.1ubuntu2
ubuntu/dbus 1.10.6-1ubuntu3.3
ubuntu/debconf 1.5.58ubuntu1
ubuntu/debianutils 4.7
ubuntu/diffutils 1:3.3-3
ubuntu/dpkg-dev 1.18.4ubuntu1.5
ubuntu/dpkg 1.18.4ubuntu1.5
ubuntu/e2fslibs 1.42.13-1ubuntu1
ubuntu/e2fsprogs 1.42.13-1ubuntu1
ubuntu/file 1:5.25-2ubuntu1.1
ubuntu/findutils 4.6.0 git 20160126-2
ubuntu/fontconfig-config 2.11.94-0ubuntu1.1
ubuntu/fontconfig 2.11.94-0ubuntu1.1
ubuntu/fonts-dejavu-core 2.35-1
ubuntu/fonts-texgyre 20150923-1
ubuntu/g -5 5.4.0-6ubuntu1~16.04.10
ubuntu/g 4:5.3.1-1ubuntu1
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ubuntu/gcc-6-base 6.0.1-0ubuntu1
ubuntu/gcc 4:5.3.1-1ubuntu1
ubuntu/geoip-database 20160408-1
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ubuntu/gir1.2-pango-1.0 1.38.1-1
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ubuntu/hostname 3.16ubuntu2
ubuntu/icu-devtools 55.1-7ubuntu0.4
ubuntu/init-system-helpers 1.29ubuntu4
ubuntu/init 1.29ubuntu4
ubuntu/initscripts 2.88dsf-59.3ubuntu2
ubuntu/insserv 1.14.0-5ubuntu3
ubuntu/ldap-utils 2.4.42 dfsg-2ubuntu3.4
ubuntu/less 481-2.1ubuntu0.2
ubuntu/libacl1 2.2.52-3
ubuntu/libapparmor1 2.10.95-0ubuntu2.10
ubuntu/libapt-pkg5.0 1.2.29
ubuntu/libasan2 5.4.0-6ubuntu1~16.04.10
ubuntu/libasn1-8-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libatomic1 5.4.0-6ubuntu1~16.04.10
ubuntu/libattr1 1:2.4.47-2
ubuntu/libaudit-common 1:2.4.5-1ubuntu2.1
ubuntu/libaudit1 1:2.4.5-1ubuntu2.1
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ubuntu/libavahi-common-data 0.6.32~rc dfsg-1ubuntu2.2
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ubuntu/libbasicobjects0 0.5.0-1
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ubuntu/libc-bin 2.23-0ubuntu10
ubuntu/libc-dev-bin 2.23-0ubuntu10
ubuntu/libc6-dev 2.23-0ubuntu10
ubuntu/libc6 2.23-0ubuntu10
ubuntu/libcairo-gobject2 1.14.6-1
ubuntu/libcairo-script-interpreter2 1.14.6-1
ubuntu/libcairo2-dev 1.14.6-1
ubuntu/libcairo2 1.14.6-1
ubuntu/libcap-ng0 0.7.7-1
ubuntu/libcap2-bin 1:2.24-12
ubuntu/libcap2 1:2.24-12
ubuntu/libcc1-0 5.4.0-6ubuntu1~16.04.10
ubuntu/libcilkrts5 5.4.0-6ubuntu1~16.04.10
ubuntu/libcollection4 0.5.0-1
ubuntu/libcomerr2 1.42.13-1ubuntu1
ubuntu/libcrack2 2.9.2-1ubuntu1
ubuntu/libcryptsetup4 2:1.6.6-5ubuntu2.1
ubuntu/libcups2 2.1.3-4ubuntu0.6
ubuntu/libcurl3-gnutls 7.47.0-1ubuntu2.11
ubuntu/libcurl3 7.47.0-1ubuntu2.11
ubuntu/libcurl4-openssl-dev 7.47.0-1ubuntu2.11
ubuntu/libdatrie1 0.2.10-2
ubuntu/libdb5.3 5.3.28-11ubuntu0.1
ubuntu/libdbus-1-3 1.10.6-1ubuntu3.3
ubuntu/libdebconfclient0 0.198ubuntu1
ubuntu/libdevmapper1.02.1 2:1.02.110-1ubuntu10
ubuntu/libdhash1 0.5.0-1
ubuntu/libdns162 1:9.10.3.dfsg.P4-8ubuntu1.11
ubuntu/libdpkg-perl 1.18.4ubuntu1.5
ubuntu/libdrm-amdgpu1 2.4.91-2~16.04.1
ubuntu/libdrm-common 2.4.91-2~16.04.1
ubuntu/libdrm-intel1 2.4.91-2~16.04.1
ubuntu/libdrm-nouveau2 2.4.91-2~16.04.1
ubuntu/libdrm-radeon1 2.4.91-2~16.04.1
ubuntu/libdrm2 2.4.91-2~16.04.1
ubuntu/libedit2 3.1-20150325-1ubuntu2
ubuntu/libelf1 0.165-3ubuntu1.1
ubuntu/liberror-perl 0.17-1.2
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ubuntu/libexpat1 2.1.0-7ubuntu0.16.04.3
ubuntu/libfdisk1 2.27.1-6ubuntu3.6
ubuntu/libffi6 3.2.1-4
ubuntu/libfontconfig1-dev 2.11.94-0ubuntu1.1
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ubuntu/libfontenc1 1:1.1.3-1
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ubuntu/libfreetype6 2.6.1-0.1ubuntu2.3
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ubuntu/libgomp1 5.4.0-6ubuntu1~16.04.10
ubuntu/libgpg-error0 1.21-2ubuntu1
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ubuntu/libgssapi3-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
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ubuntu/libharfbuzz-gobject0 1.0.1-1ubuntu0.1
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ubuntu/libicu55 55.1-7ubuntu0.4
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ubuntu/libisccfg140 1:9.10.3.dfsg.P4-8ubuntu1.11
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ubuntu/libitm1 5.4.0-6ubuntu1~16.04.10
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ubuntu/libjbig0 2.1-3.1
ubuntu/libjpeg-dev 8c-2ubuntu8
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ubuntu/libjpeg8-dev 8c-2ubuntu8
ubuntu/libjpeg8 8c-2ubuntu8
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ubuntu/libpangoft2-1.0-0 1.38.1-1
ubuntu/libpangoxft-1.0-0 1.38.1-1
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ubuntu/libpciaccess0 0.13.4-1
ubuntu/libpcre16-3 2:8.38-3.1
ubuntu/libpcre3-dev 2:8.38-3.1
ubuntu/libpcre32-3 2:8.38-3.1
ubuntu/libpcre3 2:8.38-3.1
ubuntu/libpcrecpp0v5 2:8.38-3.1
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ubuntu/libthai0 0.1.24-2
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ubuntu/libtiff5 4.0.6-1ubuntu0.4
ubuntu/libtiffxx5 4.0.6-1ubuntu0.4
ubuntu/libtinfo-dev 6.0 20160213-1ubuntu1
ubuntu/libtinfo5 6.0 20160213-1ubuntu1
ubuntu/libtsan0 5.4.0-6ubuntu1~16.04.10
ubuntu/libubsan0 5.4.0-6ubuntu1~16.04.10
ubuntu/libudev1 229-4ubuntu21.8
ubuntu/libusb-0.1-4 2:0.1.12-28
ubuntu/libustr-1.0-1 1.0.4-5
ubuntu/libuuid1 2.27.1-6ubuntu3.6
ubuntu/libuv1 1.8.0-1
ubuntu/libwbclient0 2:4.3.11 dfsg-0ubuntu0.16.04.18
ubuntu/libwind0-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
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ubuntu/libxcb-glx0 1.11.1-1ubuntu1
ubuntu/libxcb-present0 1.11.1-1ubuntu1
ubuntu/libxcb-render0-dev 1.11.1-1ubuntu1
ubuntu/libxcb-render0 1.11.1-1ubuntu1
ubuntu/libxcb-shm0-dev 1.11.1-1ubuntu1
ubuntu/libxcb-shm0 1.11.1-1ubuntu1
ubuntu/libxcb-sync1 1.11.1-1ubuntu1
ubuntu/libxcb1-dev 1.11.1-1ubuntu1
ubuntu/libxcb1 1.11.1-1ubuntu1
ubuntu/libxdamage1 1:1.1.4-2
ubuntu/libxdmcp-dev 1:1.1.2-1.1
ubuntu/libxdmcp6 1:1.1.2-1.1
ubuntu/libxext-dev 2:1.3.3-1
ubuntu/libxext6 2:1.3.3-1
ubuntu/libxfixes3 1:5.0.1-2
ubuntu/libxfont1 1:1.5.1-1ubuntu0.16.04.4
ubuntu/libxft-dev 2.3.2-1
ubuntu/libxft2 2.3.2-1
ubuntu/libxkbfile1 1:1.0.9-0ubuntu1
ubuntu/libxml2-dev 2.9.3 dfsg1-1ubuntu0.6
ubuntu/libxml2 2.9.3 dfsg1-1ubuntu0.6
ubuntu/libxmu6 2:1.1.2-2
ubuntu/libxmuu1 2:1.1.2-2
ubuntu/libxpm4 1:3.5.11-1ubuntu0.16.04.1
ubuntu/libxrender-dev 1:0.9.9-0ubuntu1
ubuntu/libxrender1 1:0.9.9-0ubuntu1
ubuntu/libxshmfence1 1.2-1
ubuntu/libxt-dev 1:1.1.5-0ubuntu1
ubuntu/libxt6 1:1.1.5-0ubuntu1
ubuntu/libxxf86vm1 1:1.1.4-1
ubuntu/linux-libc-dev 4.4.0-140.166
ubuntu/locales 2.23-0ubuntu10
ubuntu/login 1:4.2-3.1ubuntu5.3
ubuntu/lsb-base 9.20160110ubuntu0.2
ubuntu/make 4.1-6
ubuntu/makedev 2.3.1-93ubuntu2~ubuntu16.04.1
ubuntu/mawk 1.3.3-17ubuntu2
ubuntu/mime-support 3.59ubuntu1
ubuntu/mount 2.27.1-6ubuntu3.6
ubuntu/multiarch-support 2.23-0ubuntu10
ubuntu/ncurses-base 6.0 20160213-1ubuntu1
ubuntu/ncurses-bin 6.0 20160213-1ubuntu1
ubuntu/nodejs 4.2.6~dfsg-1ubuntu4.2
ubuntu/openssl 1.0.2g-1ubuntu4.14
ubuntu/passwd 1:4.2-3.1ubuntu5.3
ubuntu/patch 2.7.5-1ubuntu0.16.04.1
ubuntu/perl-base 5.22.1-9ubuntu0.6
ubuntu/perl-modules-5.22 5.22.1-9ubuntu0.6
ubuntu/perl 5.22.1-9ubuntu0.6
ubuntu/pkg-config 0.29.1-0ubuntu1
ubuntu/procps 2:3.3.10-4ubuntu2.4
ubuntu/python-minimal 2.7.12-1~16.04
ubuntu/python-sss 1.13.4-1ubuntu1.12
ubuntu/python-talloc 2.1.5-2
ubuntu/python2.7-minimal 2.7.12-1ubuntu0~16.04.4
ubuntu/python2.7 2.7.12-1ubuntu0~16.04.4
ubuntu/python 2.7.12-1~16.04
ubuntu/readline-common 6.3-8ubuntu2
ubuntu/rsync 3.1.1-3ubuntu1.2
ubuntu/samba-libs 2:4.3.11 dfsg-0ubuntu0.16.04.18
ubuntu/sed 4.2.2-7
ubuntu/sensible-utils 0.0.9ubuntu0.16.04.1
ubuntu/sssd-ad-common 1.13.4-1ubuntu1.12
ubuntu/sssd-ad 1.13.4-1ubuntu1.12
ubuntu/sssd-common 1.13.4-1ubuntu1.12
ubuntu/sssd-ipa 1.13.4-1ubuntu1.12
ubuntu/sssd-krb5-common 1.13.4-1ubuntu1.12
ubuntu/sssd-krb5 1.13.4-1ubuntu1.12
ubuntu/sssd-ldap 1.13.4-1ubuntu1.12
ubuntu/sssd-proxy 1.13.4-1ubuntu1.12
ubuntu/sssd 1.13.4-1ubuntu1.12
ubuntu/systemd-sysv 229-4ubuntu21.8
ubuntu/systemd 229-4ubuntu21.8
ubuntu/sysv-rc 2.88dsf-59.3ubuntu2
ubuntu/sysvinit-utils 2.88dsf-59.3ubuntu2
ubuntu/tar 1.28-2.1ubuntu0.1
ubuntu/tex-common 6.04ubuntu1
ubuntu/tzdata 2018g-0ubuntu0.16.04
ubuntu/ubuntu-keyring 2012.05.19
ubuntu/ucf 3.0036
ubuntu/unzip 6.0-20ubuntu1
ubuntu/util-linux 2.27.1-6ubuntu3.6
ubuntu/wamerican 7.1-1
ubuntu/wget 1.17.1-1ubuntu1.4
ubuntu/x11-common 1:7.7 13ubuntu3.1
ubuntu/x11-xkb-utils 7.7 2
ubuntu/x11proto-core-dev 7.0.31-1~ubuntu16.04.2
ubuntu/x11proto-input-dev 2.3.1-1
ubuntu/x11proto-kb-dev 1.0.7-0ubuntu1
ubuntu/x11proto-render-dev 2:0.11.1-2
ubuntu/x11proto-xext-dev 7.3.0-1
ubuntu/xauth 1:1.0.9-1ubuntu2
ubuntu/xfonts-base 1:1.0.4 nmu1
ubuntu/xfonts-encodings 1:1.0.4-2
ubuntu/xfonts-utils 1:7.7 3ubuntu0.16.04.2
ubuntu/xkb-data 2.16-1ubuntu1
ubuntu/xorg-sgml-doctools 1:1.11-1
ubuntu/xserver-common 2:1.18.4-0ubuntu0.8
ubuntu/xtrans-dev 1.3.5-1
ubuntu/xvfb 2:1.18.4-0ubuntu0.8
ubuntu/xz-utils 5.1.1alpha 20120614-2ubuntu2
ubuntu/zip 3.0-11
ubuntu/zlib1g-dev 1:1.2.8.dfsg-2ubuntu4.1
ubuntu/zlib1g 1:1.2.8.dfsg-2ubuntu4.1

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