Ecosyste.ms: Docker
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ctomlins/rna-seq-pipeline : latest
Latest release: about 3 years ago - 51 downloads - 498 dependencies
JSONDependencies
- ubuntu/adduser 3.118ubuntu2
- ubuntu/alsa-topology-conf 1.2.2-1
- ubuntu/alsa-ucm-conf 1.2.2-1ubuntu0.11
- ubuntu/apt 2.0.6
- ubuntu/at-spi2-core 2.36.0-2
- ubuntu/base-files 11ubuntu5.4
- ubuntu/base-passwd 3.5.47
- ubuntu/bash 5.0-6ubuntu1.1
- ubuntu/bedtools 2.27.1 dfsg-4ubuntu1
- ubuntu/binutils-common 2.34-6ubuntu1.3
- ubuntu/binutils-x86-64-linux-gnu 2.34-6ubuntu1.3
- ubuntu/binutils 2.34-6ubuntu1.3
- ubuntu/bsdutils 1:2.34-0.1ubuntu9.1
- ubuntu/build-essential 12.8ubuntu1.1
- ubuntu/bzip2-doc 1.0.8-2
- ubuntu/bzip2 1.0.8-2
- ubuntu/ca-certificates-java 20190405ubuntu1
- ubuntu/ca-certificates 20210119~20.04.2
- ubuntu/coreutils 8.30-3ubuntu2
- ubuntu/cpp-9 9.3.0-17ubuntu1~20.04
- ubuntu/cpp 4:9.3.0-1ubuntu2
- ubuntu/curl 7.68.0-1ubuntu2.7
- ubuntu/dash 0.5.10.2-6
- ubuntu/dbus-user-session 1.12.16-2ubuntu2.1
- ubuntu/dbus 1.12.16-2ubuntu2.1
- ubuntu/dconf-gsettings-backend 0.36.0-1
- ubuntu/dconf-service 0.36.0-1
- ubuntu/debconf 1.5.73
- ubuntu/debianutils 4.9.1
- ubuntu/default-jre-headless 2:1.11-72
- ubuntu/default-jre 2:1.11-72
- ubuntu/diffutils 1:3.7-3
- ubuntu/dirmngr 2.2.19-3ubuntu2.1
- ubuntu/distro-info-data 0.43ubuntu1.9
- ubuntu/dmsetup 2:1.02.167-1ubuntu1
- ubuntu/dpkg-dev 1.19.7ubuntu3
- ubuntu/dpkg 1.19.7ubuntu3
- ubuntu/e2fsprogs 1.45.5-2ubuntu1
- ubuntu/fakeroot 1.24-1
- ubuntu/fdisk 2.34-0.1ubuntu9.1
- ubuntu/file 1:5.38-4
- ubuntu/findutils 4.7.0-1ubuntu1
- ubuntu/fontconfig-config 2.13.1-2ubuntu3
- ubuntu/fonts-dejavu-core 2.37-1
- ubuntu/fonts-dejavu-extra 2.37-1
- ubuntu/g -9 9.3.0-17ubuntu1~20.04
- ubuntu/g 4:9.3.0-1ubuntu2
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- ubuntu/gcc 4:9.3.0-1ubuntu2
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- ubuntu/gir1.2-packagekitglib-1.0 1.1.13-2ubuntu1.1
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- net.sf.jopt-simple:jopt-simple 5.0.3
- com.google.guava:guava 15.0
- commons-io:commons-io 2.4
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- commons-logging:commons-logging 1.1.1
- jrt-fs:jrt-fs 11.0.11
- org.GNOME.Accessibility.AtkWrapper:java-atk-wrapper *
- org.apache.commons:commons-collections4 4.3
- org.apache.commons:commons-compress 1.19
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- org.apache.commons:commons-math3 3.5
- org.apache.logging.log4j:log4j-api 2.5
- org.apache.logging.log4j:log4j-core 2.5
- org.debian.security.UpdateCertificates:ca-certificates-java *
- org.sharegov:mjson 1.4.1
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- python 3.8.10
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- Markdown 3.3.4
- MarkupSafe 2.0.1
- NanoCount 1.0.0.post3
- Pillow 8.4.0
- PyGObject 3.36.0
- PyYAML 6.0
- Pygments 2.10.0
- argcomplete 1.12.3
- argh 0.26.2
- argparse 1.4.0
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- certifi 2019.11.28
- chardet 3.0.4
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- colorlog 6.5.0
- colormath 3.0.0
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- distro-info 0.23ubuntu1
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- gffutils 0.10.1
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- humanfriendly 10.0
- idna 2.8
- kiwisolver 1.3.2
- lzstring 1.0.4
- matplotlib 3.4.3
- multiqc 1.11
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- pandas 1.3.4
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- pybedtools 0.8.2
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- pyfaidx 0.6.3.1
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- python-apt 2.0.0 ubuntu0.20.4.6
- python-dateutil 2.8.2
- pytz 2021.3
- requests-unixsocket 0.2.0
- requests 2.22.0
- retrying 1.3.3
- rich 10.12.0
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- setuptools 45.2.0
- simplejson 3.17.5
- six 1.14.0
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- unattended-upgrades 0.1
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- wheel 0.34.2