Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
bioxfu/xseurat2 : latest
Latest release: almost 2 years ago - 36 downloads - 982 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- AUCell 1.20.2
- AnnoProbe 0.1.7
- AnnotationDbi 1.60.0
- AnnotationFilter 1.22.0
- BH 1.81.0-1
- BSgenome.Hsapiens.UCSC.hg38 1.4.5
- BSgenome.Mmusculus.UCSC.mm10 1.4.3
- BSgenome 1.66.2
- Biobase 2.58.0
- BiocFileCache 2.6.0
- BiocGenerics 0.44.0
- BiocIO 1.8.0
- BiocManager 1.30.19
- BiocNeighbors 1.16.0
- BiocParallel 1.32.5
- BiocSingular 1.14.0
- BiocVersion 3.16.0
- Biostrings 2.66.0
- CellChat 1.6.1
- ComplexHeatmap 2.14.0
- DBI 1.1.3
- DDRTree 0.1.5
- DEoptimR 1.0-11
- DOSE 3.24.2
- DT 0.27
- DelayedArray 0.24.0
- DelayedMatrixStats 1.20.0
- DoubletFinder 2.0.3
- EnsDb.Hsapiens.v86 2.99.0
- EnsDb.Mmusculus.v79 2.99.0
- FNN 1.1.3.1
- FactoMineR 2.7
- Formula 1.2-4
- GENIE3 1.20.0
- GO.db 3.16.0
- GOSemSim 2.24.0
- GSEABase 1.60.0
- GSVA 1.46.0
- GenomeInfoDb 1.34.9
- GenomeInfoDbData 1.2.9
- GenomicAlignments 1.34.0
- GenomicFeatures 1.50.4
- GenomicRanges 1.50.2
- GetoptLong 1.0.5
- GlobalOptions 0.1.2
- HDF5Array 1.26.0
- HDO.db 0.99.1
- HSMMSingleCell 1.18.0
- HiddenMarkov 1.8-13
- Hmisc 4.8-0
- IRanges 2.32.0
- KEGG.db 1.0
- KEGGREST 1.38.0
- KernSmooth 2.23-20
- MASS 7.3-58.1
- Matrix 1.5-3
- MatrixGenerics 1.10.0
- MatrixModels 0.5-1
- NMF 0.25
- ProjecTILs 3.0.3
- ProtGenerics 1.30.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RANN 2.6.1
- RBGL 1.74.0
- RColorBrewer 1.1-3
- RCurl 1.98-1.10
- RMariaDB 1.2.2
- ROCR 1.0-11
- RSQLite 2.2.20
- RSpectra 0.16-1
- RUnit 0.4.32
- RcisTarget 1.18.2
- Rcpp 1.0.10
- RcppAnnoy 0.0.20
- RcppArmadillo 0.11.4.3.1
- RcppEigen 0.3.3.9.3
- RcppHNSW 0.4.1
- RcppParallel 5.1.6
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppRoll 0.3.0
- RcppTOML 0.2.2
- Rhdf5lib 1.20.0
- Rhtslib 2.0.0
- Rsamtools 2.14.0
- Rtsne 0.16
- S4Vectors 0.36.1
- SCENIC 1.2.4
- ScaledMatrix 1.6.0
- Seurat 4.3.0
- SeuratDisk 0.0.0.9019
- SeuratObject 4.1.3
- SeuratWrappers 0.3.0
- Signac 1.9.0
- SingleCellExperiment 1.20.0
- SingleR 2.0.0
- SoupX 1.6.2
- SparseM 1.81
- SummarizedExperiment 1.28.0
- TH.data 1.1-1
- TTR 0.24.3
- UCSCXenaShiny 1.1.9
- UCSCXenaTools 1.4.8
- UCell 2.2.0
- UpSetR 1.4.0
- VGAM 1.1-7
- VIM 6.2.2
- VariantAnnotation 1.44.0
- XML 3.99-0.13
- XVector 0.38.0
- abind 1.4-5
- ade4 1.7-22
- airr 1.4.1
- annotate 1.76.0
- anytime 0.3.9
- ape 5.6-2
- aplot 0.1.9
- argparse 2.2.1
- arrow 10.0.1
- askpass 1.1
- assertthat 0.2.1
- backports 1.4.1
- base64enc 0.1-3
- base 4.2.2
- beachmat 2.14.0
- beachtest 1.0.0
- biocViews 1.66.2
- biomaRt 2.54.0
- biovizBase 1.46.0
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.3
- bookdown 0.32
- boot 1.3-28
- brew 1.0-8
- brio 1.1.3
- broom 1.0.3
- bslib 0.4.2
- caTools 1.18.2
- cachem 1.0.6
- callr 3.7.3
- car 3.1-1
- carData 3.0-5
- cellcall 0.0.0.9000
- cellranger 1.1.0
- checkmate 2.1.0
- circlize 0.4.15
- class 7.3-20
- cli 3.6.0
- clipr 0.8.0
- clue 0.3-64
- cluster 2.1.4
- clusterProfiler 4.6.0
- coda 0.19-4
- codeModules 0.1.3
- codetools 0.2-18
- coin 1.4-2
- colorspace 2.1-0
- combinat 0.0-8
- commonmark 1.8.1
- compiler 4.2.2
- corrplot 0.92
- cowplot 1.1.1
- cpp11 0.4.3
- crayon 1.5.2
- createKEGGdb 0.0.2
- credentials 1.3.2
- crosstalk 1.2.0
- cubature 2.0.4.6
- curl 5.0.0
- data.table 1.14.6
- datasets 4.2.2
- dbplyr 2.3.0
- deldir 1.0-6
- dendextend 1.16.0
- desc 1.4.2
- destiny 3.12.0
- devtools 2.4.5
- dichromat 2.0-0.1
- diffobj 0.3.5
- digest 0.6.31
- diptest 0.76-0
- doParallel 1.0.17
- docopt 0.7.1
- dotCall64 1.0-2
- downlit 0.4.2
- downloader 0.4
- dplyr 1.1.0
- dqrng 0.3.0
- dtplyr 1.2.2
- dynamicTreeCut 1.63-1
- e1071 1.7-13
- edgeR 3.40.2
- ellipse 0.4.3
- ellipsis 0.3.2
- emmeans 1.8.4-1
- enrichplot 1.18.3
- ensembldb 2.22.0
- estimability 1.4.1
- evaluate 0.20
- evd 2.3-6.1
- evmix 2.12
- expm 0.999-7
- ezcox 1.0.2
- factoextra 1.0.7
- fansi 1.0.4
- farver 2.1.1
- fastICA 1.2-3
- fastcluster 1.2.3
- fastmap 1.1.0
- fastmatch 1.1-3
- fgsea 1.24.0
- fields 14.1
- filelock 1.0.2
- findpython 1.0.7
- fitdistrplus 1.1-8
- flashClust 1.01-2
- flexmix 2.3-18
- fontawesome 0.5.0
- forcats 1.0.0
- foreach 1.5.2
- foreign 0.8-83
- forestmodel 0.6.2
- formatR 1.14
- fpc 2.2-10
- fs 1.6.0
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.10.0
- future 1.31.0
- gargle 1.3.0
- generics 0.1.3
- gert 1.9.2
- ggalluvial 0.12.4
- ggforce 0.4.1
- ggfun 0.0.9
- ggnetwork 0.5.10
- ggnewscale 0.4.8
- ggplot.multistats 1.0.0
- ggplot2 3.4.0
- ggplotify 0.1.0
- ggpubr 0.5.0
- ggraph 2.1.0
- ggrepel 0.9.3
- ggridges 0.5.4
- ggsci 2.9
- ggseqlogo 0.1
- ggsignif 0.6.4
- ggthemes 4.2.4
- ggtree 3.6.2
- gh 1.3.1
- gitcreds 0.1.2
- globals 0.16.2
- glue 1.6.2
- goftest 1.2-3
- googledrive 2.0.0
- googlesheets4 1.0.1
- gplots 3.1.3
- grDevices 4.2.2
- graph 1.76.0
- graphics 4.2.2
- graphlayouts 0.8.4
- grid 4.2.2
- gridBase 0.4-7
- gridExtra 2.3
- gridGraphics 0.5-1
- gsl 2.1-8
- gson 0.0.9
- gtable 0.3.1
- gtools 3.9.4
- harmony 0.1.1
- haven 2.5.1
- hdf5r 1.3.8
- here 1.0.1
- hexbin 1.28.2
- highr 0.10
- hms 1.1.2
- htmlTable 2.4.1
- htmltools 0.5.4
- htmlwidgets 1.6.1
- httpuv 1.6.8
- httr 1.4.4
- ica 1.0-3
- ids 1.0.1
- igraph 1.3.5
- immunarch 0.9.0
- infercnv 1.14.0
- ini 0.3.1
- interp 1.1-3
- irlba 2.3.5.1
- isoband 0.2.7
- iterators 1.0.14
- jpeg 0.1-10
- jquerylib 0.1.4
- jsonlite 1.8.4
- kernlab 0.9-32
- knitr 1.42
- knn.covertree 1.0
- labeling 0.4.2
- laeken 0.5.2
- lambda.r 1.2.4
- later 1.3.0
- lattice 0.20-45
- latticeExtra 0.6-30
- lazyeval 0.2.2
- leaps 3.1
- leiden 0.4.3
- leidenbase 0.1.14
- libcoin 1.0-9
- lifecycle 1.0.3
- limma 3.54.1
- linkXTS 1.0
- listenv 0.9.0
- littler 0.3.17
- lme4 1.1-31
- lmtest 0.9-40
- lobstr 1.1.2
- locfit 1.5-9.7
- lubridate 1.9.1
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- magrittr 2.0.3
- maps 3.4.1
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- methods 4.2.2
- mgcv 1.8-41
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- multcomp 1.4-20
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- org.Mm.eg.db 3.16.0
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- permute 0.9-7
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- progress 1.2.2
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- proxy 0.4-27
- pryr 0.1.6
- ps 1.7.2
- psych 2.2.9
- purrr 1.0.1
- purrrlyr 0.0.8
- qlcMatrix 0.9.7
- quadprog 1.5-8
- quantreg 5.94
- qvalue 2.30.0
- ragg 1.2.5
- ranger 0.14.1
- rappdirs 0.3.3
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- shape 1.4.6
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- org.debian.security.UpdateCertificates:ca-certificates-java *
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