bioxfu/xseurat2 : latest
Latest release: over 3 years ago - 156 downloads - 982 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- AUCell 1.20.2
- AnnoProbe 0.1.7
- AnnotationDbi 1.60.0
- AnnotationFilter 1.22.0
- BH 1.81.0-1
- BSgenome.Hsapiens.UCSC.hg38 1.4.5
- BSgenome.Mmusculus.UCSC.mm10 1.4.3
- BSgenome 1.66.2
- Biobase 2.58.0
- BiocFileCache 2.6.0
- BiocGenerics 0.44.0
- BiocIO 1.8.0
- BiocManager 1.30.19
- BiocNeighbors 1.16.0
- BiocParallel 1.32.5
- BiocSingular 1.14.0
- BiocVersion 3.16.0
- Biostrings 2.66.0
- CellChat 1.6.1
- ComplexHeatmap 2.14.0
- DBI 1.1.3
- DDRTree 0.1.5
- DEoptimR 1.0-11
- DOSE 3.24.2
- DT 0.27
- DelayedArray 0.24.0
- DelayedMatrixStats 1.20.0
- DoubletFinder 2.0.3
- EnsDb.Hsapiens.v86 2.99.0
- EnsDb.Mmusculus.v79 2.99.0
- FNN 1.1.3.1
- FactoMineR 2.7
- Formula 1.2-4
- GENIE3 1.20.0
- GO.db 3.16.0
- GOSemSim 2.24.0
- GSEABase 1.60.0
- GSVA 1.46.0
- GenomeInfoDb 1.34.9
- GenomeInfoDbData 1.2.9
- GenomicAlignments 1.34.0
- GenomicFeatures 1.50.4
- GenomicRanges 1.50.2
- GetoptLong 1.0.5
- GlobalOptions 0.1.2
- HDF5Array 1.26.0
- HDO.db 0.99.1
- HSMMSingleCell 1.18.0
- HiddenMarkov 1.8-13
- Hmisc 4.8-0
- IRanges 2.32.0
- KEGG.db 1.0
- KEGGREST 1.38.0
- KernSmooth 2.23-20
- MASS 7.3-58.1
- Matrix 1.5-3
- MatrixGenerics 1.10.0
- MatrixModels 0.5-1
- NMF 0.25
- ProjecTILs 3.0.3
- ProtGenerics 1.30.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RANN 2.6.1
- RBGL 1.74.0
- RColorBrewer 1.1-3
- RCurl 1.98-1.10
- RMariaDB 1.2.2
- ROCR 1.0-11
- RSQLite 2.2.20
- RSpectra 0.16-1
- RUnit 0.4.32
- RcisTarget 1.18.2
- Rcpp 1.0.10
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- RcppHNSW 0.4.1
- RcppParallel 5.1.6
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppRoll 0.3.0
- RcppTOML 0.2.2
- Rhdf5lib 1.20.0
- Rhtslib 2.0.0
- Rsamtools 2.14.0
- Rtsne 0.16
- S4Vectors 0.36.1
- SCENIC 1.2.4
- ScaledMatrix 1.6.0
- Seurat 4.3.0
- SeuratDisk 0.0.0.9019
- SeuratObject 4.1.3
- SeuratWrappers 0.3.0
- Signac 1.9.0
- SingleCellExperiment 1.20.0
- SingleR 2.0.0
- SoupX 1.6.2
- SparseM 1.81
- SummarizedExperiment 1.28.0
- TH.data 1.1-1
- TTR 0.24.3
- UCSCXenaShiny 1.1.9
- UCSCXenaTools 1.4.8
- UCell 2.2.0
- UpSetR 1.4.0
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- VIM 6.2.2
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- base 4.2.2
- beachmat 2.14.0
- beachtest 1.0.0
- biocViews 1.66.2
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- bit 4.0.5
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- circlize 0.4.15
- class 7.3-20
- cli 3.6.0
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- clue 0.3-64
- cluster 2.1.4
- clusterProfiler 4.6.0
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