bigomics/omicsplayground-base : ub2204_v2

Ubuntu 22.04.3 LTS

Latest release: about 1 year ago - 1,554 downloads - 1,536 dependencies

JSON

Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
RaggedExperiment 1.18.0
AnnotationDbi 1.56.2
AnnotationFilter 1.18.0
AsioHeaders 1.22.1-2
BH 1.81.0-1
BSgenome 1.62.0
Biobase 2.54.0
BiocFileCache 2.2.1
BiocGenerics 0.40.0
BiocIO 1.4.0
BiocManager 1.30.22
BiocNeighbors 1.12.0
BiocParallel 1.28.3
BiocSingular 1.10.0
BiocVersion 3.14.0
Biostrings 2.62.0
Boruta 8.0.0
Cairo 1.6-1
ComICS 1.0.4
ComplexHeatmap 2.10.0
DBI 1.1.3
DDRTree 0.1.5
DESeq2 1.34.0
DEoptimR 1.1-3
DEsingle 1.14.0
DT 0.30
DeMixT 1.10.0
DeconRNASeq 1.36.0
DelayedArray 0.20.0
DelayedMatrixStats 1.16.0
DiagrammeR 1.0.10
EPIC 1.1.7
EnsDb.Hsapiens.v86 2.99.0
EnsDb.Mmusculus.v79 2.99.0
EnsDb.Rnorvegicus.v79 2.99.0
FNN 1.1.3.2
FastGGM 1.0
Formula 1.2-5
GEOmetadb 1.56.0
GEOquery 2.62.2
GO.db 3.14.0
GSEABase 1.56.0
GSVA 1.42.0
GenomeInfoDb 1.30.1
GenomeInfoDbData 1.2.7
GenomicAlignments 1.30.0
GenomicDataCommons 1.18.0
GenomicFeatures 1.46.5
GenomicFiles 1.30.0
GenomicRanges 1.46.1
GetoptLong 1.0.5
GlobalOptions 0.1.2
HDF5Array 1.22.1
HSMMSingleCell 1.14.0
HiddenMarkov 1.8-13
Hmisc 5.1-1
IRanges 2.28.0
ISOpureR 1.1.3
JADE 2.0-4
KEGG.db 3.2.4
KEGGREST 1.34.0
KEGGgraph 1.54.0
KernSmooth 2.23-20
Lmoments 1.3-1
MASS 7.3-55
MAST 1.20.0
Matrix 1.4-0
Matrix 1.6-1.1
MatrixGenerics 1.6.0
MatrixModels 0.5-2
MultiAssayExperiment 1.20.0
NNLM 0.4.4
PCSF 0.99.1
ProtGenerics 1.26.0
R.methodsS3 1.8.2
R.oo 1.25.0
R.utils 2.12.2
R6 2.5.1
RANN 2.6.1
RBGL 1.70.0
RColorBrewer 1.1-3
RCurl 1.98-1.12
RMTstat 0.3.1
ROCR 1.0-11
RSQLite 2.3.1
RSpectra 0.16-1
RUnit 0.4.32
Rcpp 1.0.11
RVenn 1.1.0
RcppAnnoy 0.0.21
RcppArmadillo 0.12.6.4.0
RcppEigen 0.3.3.9.3
RcppGSL 0.3.13
RcppGSLExample 0.0.3
RcppHNSW 0.5.0
RcppParallel 5.1.7
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppTOML 0.2.2
RcppZiggurat 0.1.6
Rdpack 2.5
RdpackTester 1.0
ResidualMatrix 1.4.0
Rfast 2.0.8
Rgraphviz 2.38.0
Rhdf5lib 1.16.0
RhpcBLASctl 0.23-42
Rhtslib 1.26.0
Rook 1.2
Rsamtools 2.10.0
Rtsne 0.16
S4Vectors 0.32.4
SBGNview.data 1.8.0
SBGNview 1.8.0
SILGGM 1.0.0
SQUAREM 2021.1
ScaledMatrix 1.2.0
Seurat 4.4.0
SeuratObject 4.1.4
SingleCellExperiment 1.16.0
SmartSVA 0.1.3
SparseM 1.81
SummarizedExperiment 1.24.0
SuppDists 1.1-9.7
TCGAbiolinks 2.22.4
TCGAbiolinksGUI.data 1.14.1
TCGAutils 1.14.1
TFisher 0.2.0
TH.data 1.1-2
TSP 1.2-4
TxDb.Hsapiens.UCSC.hg19.knownGene 3.2.2
TxDb.Mmusculus.UCSC.mm10.knownGene 3.10.0
UNDO 1.36.0
V8 4.4.0
VGAM 1.1-9
VariantAnnotation 1.40.0
WGCNA 1.72-1
XML 3.99-0.14
XVector 0.34.0
abind 1.4-5
annotate 1.72.0
anytime 0.3.9
ape 5.7-1
argparse 2.2.2
askpass 1.2.0
assertthat 0.2.1
audio 0.1-11
backports 1.4.1
base64enc 0.1-3
base 4.1.2
batchelor 1.10.0
bbmle 1.0.25
bdsmatrix 1.3-6
beachmat 2.10.0
beachtest 1.0.0
beepr 1.3
beeswarm 0.4.0
bigLoaders 0.0.2
bigdash 0.0.0.9003
bigomics.app 3.0.0.9000
bigomics.board.biomarker 3.0.0.9000
bigomics.board.clustering 3.0.0.9000
bigomics.board.compare 3.0.0.9000
bigomics.board.connectivity 3.0.0.9000
bigomics.board.correlation 3.0.0.9000
bigomics.board.dataview 3.0.0.9000
bigomics.board.drugconnectivity 3.0.0.9000
bigomics.board.enrichment 3.0.0.9000
bigomics.board.expression 3.0.0.9000
bigomics.board.featuremap 3.0.0.9000
bigomics.board.functional 3.0.0.9000
bigomics.board.intersection 3.0.0.9000
bigomics.board.loading 3.0.0.9000
bigomics.board.signature 3.0.0.9000
bigomics.board.singlecell 3.0.0.9000
bigomics.board.tcga 3.0.0.9000
bigomics.board.upload 3.0.0.9000
bigomics.board.user 3.0.0.9000
bigomics.board.wgcna 3.0.0.9000
bigomics.board.wordcloud 3.0.0.9000
biocViews 1.62.1
biomaRt 2.50.3
bipartite 2.18
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blastula 0.3.4
blob 1.2.4
bluster 1.4.0
bookdown 0.36
boot 1.3-28
bootstrap 2019.6
brew 1.0-8
brio 1.1.3
broom 1.0.5
bslib 0.5.1
bsutils 0.0.0.9000
bumphunter 1.36.0
ca 0.71.1
caTools 1.18.2
cachem 1.0.8
callr 3.7.3
car 3.1-2
carData 3.0-5
checkmate 2.2.0
chromote 0.1.2
chron 2.3-61
circlize 0.4.15
class 7.3-20
classInt 0.4-10
cli 3.6.1
clipr 0.8.0
clue 0.3-65
cluster 2.1.2
coda 0.19-4
codetools 0.2-18
coin 1.4-3
colorspace 2.1-0
colourpicker 1.3.0
combinat 0.0-8
commonmark 1.9.0
compiler 4.1.2
corpcor 1.6.10
corpora 0.6
corrplot 0.92
cowplot 1.1.1
cpp11 0.4.6
crayon 1.5.2
credentials 2.0.1
crosstalk 1.2.0
curl 5.1.0
data.table 1.14.8
data.tree 1.0.0
datasets 4.1.2
dbplyr 2.3.4
deldir 1.0-9
dendextend 1.17.1
densityClust 0.3.2
derfinder 1.28.0
derfinderHelper 1.28.0
desc 1.4.2
devtools 2.4.5
diagram 1.6.5
diffobj 0.3.5
digest 0.6.33
diptest 0.76-0
distillery 1.2-1
doParallel 1.0.17
doRNG 1.8.6
docopt 0.7.1
dotCall64 1.1-0
downlit 0.4.3
downloader 0.4
dplyr 1.1.3
dqrng 0.3.1
httr 1.4.7
iTALK 0.1.0
dynamicTreeCut 1.63-1
e1071 1.7-13
edgeR 3.36.0
egg 0.4.5
ellipse 0.5.0
ellipsis 0.3.2
ensembldb 2.18.4
evaluate 0.22
evd 2.3-6.1
extRemes 2.1-3
fansi 1.0.5
farver 2.1.1
fastICA 1.2-3
fastcluster 1.2.3
fastmap 1.1.1
fastmatch 1.1-4
fdrtool 1.2.17
fgsea 1.20.0
fields 15.2
filelock 1.0.2
findpython 1.0.8
firebase 0.2.1.9000
fitdistrplus 1.1-11
flashClust 1.01-2
flexdashboard 0.6.2
flexmix 2.3-19
fontawesome 0.5.2
forcats 1.0.0
foreach 1.5.2
foreign 0.8-82
formatR 1.14
fpc 2.2-10
fresh 0.2.0
fs 1.6.3
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.11.0
future 1.33.0
gamlss.data 6.0-2
gamlss.dist 6.1-1
gamlss 5.4-20
gclus 1.3.2
genefilter 1.76.0
geneplotter 1.72.0
generics 0.1.3
gert 2.0.0
getPass 0.2-2
getopt 1.20.4
ggExtra 0.10.1
ggVennDiagram 1.2.3
ggbeeswarm 0.7.2
ggdendro 0.1.23
ggfittext 0.10.1
ggforce 0.4.1
ggplot2 3.4.4
ggrepel 0.9.4
ggridges 0.5.4
ggtext 0.1.2
gh 1.4.0
gitcreds 0.1.2
glasso 1.11
glmnet 4.1-8
globals 0.16.2
glue 1.6.2
goftest 1.2-3
gplots 3.1.3
grDevices 4.1.2
graph 1.72.0
graphics 4.1.2
grid 4.1.2
gridExtra 2.3
gridGraphics 0.5-1
gridtext 0.1.5
gsubfn 0.7
gtable 0.3.4
gtools 3.9.4
harmony 1.1.0
hdf5r 1.3.8
heatmaply 1.5.0
here 1.0.1
hexbin 1.28.3
highr 0.10
hms 1.1.3
homologene 1.4.68.19.3.27
htmlTable 2.4.1
htmltools 0.5.6.1
htmlwidgets 1.6.2
httpuv 1.6.12
httr2 0.2.3
ica 1.0-3
igraph 1.5.1
iheatmapr 0.7.0
impute 1.68.0
ini 0.3.1
inspectdf 0.0.12
inum 1.0-5
ipred 0.9-14
irlba 2.3.5.1
isoband 0.2.7
isva 1.9
iterators 1.0.14
jose 1.2.0
jpeg 0.1-10
jquerylib 0.1.4
jsonlite 1.8.7
kableExtra 1.3.4
kernlab 0.9-32
knitr 1.44
labeling 0.4.3
lambda.r 1.2.4
lars 1.3
later 1.3.1
lattice 0.20-45
lava 1.7.2.1
lavaan 0.6-16
lazyeval 0.2.2
learnr 0.11.5
leiden 0.4.3
leidenbase 0.1.25
libcoin 1.0-10
lifecycle 1.0.3
liger 2.0.1
limSolve 1.5.7
limma 3.50.3
listenv 0.9.0
listviewer 4.0.0
lme4 1.1-34
lmtest 0.9-40
locfit 1.5-9.4
lpSolve 5.6.19
magrittr 2.0.3
maps 3.4.1
maptools 1.1-8
markdown 1.11
mathjaxr 1.6-0
matrixStats 1.0.0
matrixTests 0.2.3
matrixcalc 1.0-6
maxLik 1.5-2
mclust 6.0.0
memoise 2.0.1
metap 1.9
metapod 1.2.0
methods 4.1.2
mgcv 1.8-39
mime 0.12
miniUI 0.1.1.1
minqa 1.2.6
miscTools 0.6-28
mixOmics 6.18.1
mnormt 2.1.1
modeltools 0.2-23
monocle 2.22.0
morebeach 1.0.0
morebeachtests 1.0.0
msa 1.26.0
multcomp 1.4-25
multtest 2.50.0
munsell 0.5.0
mutoss 0.1-13
mvtnorm 1.2-3
mvtnormAPI 1.0-0
mygene 1.30.0
network 1.18.1
nlme 3.1-155
nloptr 2.0.3
nnet 7.3-17
nnls 1.5
numDeriv 2016.8-1.1
openssl 2.1.1
optparse 1.7.3
org.Hs.eg.db 3.14.0
org.Mm.eg.db 3.14.0
org.Rn.eg.db 3.14.0
org.testing.db 0.1
pairsD3 0.1.3
parallel 4.1.2
parallelly 1.36.0
partykit 1.2-20
patchwork 1.1.3
rtracklayer 1.54.0
pathview 1.34.0
pbapply 1.7-2
pbivnorm 0.6.0
pbkrtest 0.5.2
pcaMethods 1.86.0
permute 0.9-7
pheatmap 1.0.12
pillar 1.9.0
pingr 2.0.2
pkgbuild 1.4.2
pkgconfig 2.0.3
pkgdown 2.0.7
pkgload 1.3.3
playdata 0.1.0
plogr 0.2.0
plotly 4.10.3
plotrix 3.8-2
pls 2.8-2
plsRcox 1.7.7
plsRglm 1.5.1
plyr 1.8.9
png 0.1-8
polspline 1.1.23
polyclip 1.10-6
ppcor 1.1
prabclus 2.3-2
praise 1.0.0
preprocessCore 1.56.0
prettyunits 1.2.0
processx 3.8.2
prodlim 2023.08.28
profvis 0.3.8
progress 1.2.2
progressr 0.14.0
promises 1.2.1
proteus 0.2.16
proto 1.0.0
proxy 0.4-27
ps 1.7.5
pscl 1.5.5.1
psych 2.3.9
purrr 1.0.2
qap 0.1-2
qgraph 1.9.5
qlcMatrix 0.9.7
qqconf 1.3.2
quadprog 1.5-8
quantreg 5.97
qvalue 2.26.0
rARPACK 0.11-0
ragg 1.2.6
randomForest 4.7-1.1
randomForestSRC 3.2.2
randomcoloR 1.1.0.1
ranger 0.15.1
rappdirs 0.3.3
raster 3.6-26
rbibutils 2.2.15
rcmdcheck 1.4.0
readr 2.1.4
recount 1.20.0
registry 0.5-1
rematch2 2.1.2
remotes 2.4.2.1
rentrez 1.2.3
renv 1.0.3
reshape2 1.4.4
reshape 0.8.9
restfulr 0.0.15
reticulate 1.34.0
rhdf5 2.38.1
rhdf5filters 1.6.0
risksetROC 1.0.4.1
riverplot 0.10
rjags 4-14
rjson 0.2.21
rlang 1.1.1
rliger 1.0.0
rmarkdown 2.25
rmeta 3.0
rms 6.7-1
rngtools 1.5.2
robustbase 0.99-0
roxygen2 7.2.3
rpart.plot 3.1.1
rpart 4.1.16
rprojroot 2.0.3
rstudioapi 0.15.0
rsvd 1.0.5
rsvg 2.6.0
rversions 2.1.2
rvest 1.0.3
rworldmap 1.3-8
s2 1.1.4
sandwich 3.0-2
sass 0.4.7
scales 1.2.1
scater 1.22.0
scatterD3 1.0.1
scattermore 1.2
scde 2.22.0
scran 1.22.1
sctransform 0.4.1
scuttle 1.4.0
selectr 0.4-2
seriation 1.5.1
sessioninfo 1.2.2
sever 0.0.7
sf 1.0-14
shades 1.4.0
shape 1.4.6
shiny 1.7.5.1
shinyBS 0.61.1
shinyChatR 1.1.0
shinyFeedback 0.4.0
shinyWidgets 0.8.0
shinyalert 3.0.0
shinybusy 0.3.1
shinycssloaders 1.0.0
shinydashboard 0.7.2
shinydashboardPlus 2.0.3
shinyjqui 0.4.1
shinyjs 2.1.0
shinytest2 0.3.1
shinythemes 1.2.0
sitmo 2.0.2
slam 0.1-50
sm 2.2-5.7.1
sn 2.1.1
sna 2.7-1
snow 0.4-4
sortable 0.5.0
sourcetools 0.1.7-1
sp 2.1-1
spam 2.10-0
sparseMatrixStats 1.6.0
sparsesvd 0.2-2
spatial 7.3-15
spatstat.data 3.0-3
spatstat.explore 3.2-5
spatstat.geom 3.2-7
spatstat.random 3.2-1
spatstat.sparse 3.0-3
spatstat.utils 3.0-4
splines 4.1.2
sqldf 0.4-11
statmod 1.5.0
statnet.common 4.9.0
stats4 4.1.2
stats 4.1.2
stringi 1.7.12
stringr 1.5.0
survAUC 1.2-0
survcomp 1.44.1
survival 3.2-13
survivalROC 1.0.3.1
sva 3.42.0
svgPanZoom 0.3.4
svglite 2.1.2
sys 3.4.2
systemfonts 1.0.5
tcltk 4.1.2
tensor 1.5
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.2.0
textshaping 0.3.7
tibble 3.2.1
tidyr 1.3.0
tidyselect 1.2.0
tinytex 0.48
tools 4.1.2
topGO 2.46.0
translations 4.1.2
truncdist 1.0-2
tweenr 2.0.2
tximport 1.22.0
tzdb 0.4.0
umap 0.2.10.0
units 0.8-4
urlchecker 1.0.1
usethis 2.2.2
utf8 1.2.4
utils 4.1.2
uuid 1.1-1
uwot 0.1.16
vctrs 0.6.4
vegan 2.6-4
vioplot 0.4.0
vipor 0.4.5
viridis 0.6.4
viridisLite 0.4.2
visNetwork 2.1.2
vroom 1.6.4
waiter 0.2.5
waldo 0.5.1
webshot2 0.1.1
webshot 0.5.5
websocket 1.4.1
whisker 0.4.1
withr 2.5.1
wk 0.9.0
wordcloud2 0.2.1
wordcloud 2.6
xfun 0.40
xgboost 1.7.5.1
xml2 1.3.5
xopen 1.0.0
xtable 1.8-4
yaml 2.3.7
yulab.utils 0.1.0
zip 2.3.0
zlibbioc 1.40.0
zoo 1.8-12

ubuntu/adduser 3.118ubuntu5
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ubuntu/autotools-dev 20220109.1
ubuntu/base-files 12ubuntu4.4
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ubuntu/libpq-dev 14.9-0ubuntu0.22.04.1
ubuntu/libpq5 14.9-0ubuntu0.22.04.1
ubuntu/libprocps8 2:3.3.17-6ubuntu2
ubuntu/libproj-dev 8.2.1-1
ubuntu/libproj22 8.2.1-1
ubuntu/libpsl5 0.21.0-1.2build2
ubuntu/libpthread-stubs0-dev 0.4-1build2
ubuntu/libpython3-dev 3.10.6-1~22.04
ubuntu/libpython3-stdlib 3.10.6-1~22.04
ubuntu/libpython3.10-dev 3.10.12-1~22.04.2
ubuntu/libpython3.10-minimal 3.10.12-1~22.04.2
ubuntu/libpython3.10-stdlib 3.10.12-1~22.04.2
ubuntu/libpython3.10 3.10.12-1~22.04.2
ubuntu/libqhull-dev 2020.2-4
ubuntu/libqhull-r8.0 2020.2-4
ubuntu/libqhull8.0 2020.2-4
ubuntu/libqhullcpp8.0 2020.2-4
ubuntu/libquadmath0 12.3.0-1ubuntu1~22.04
ubuntu/librbio2 1:5.10.1 dfsg-4build1
ubuntu/libreadline-dev 8.1.2-1
ubuntu/libreadline8 8.1.2-1
ubuntu/librsvg2-2 2.52.5 dfsg-3ubuntu0.2
ubuntu/librsvg2-common 2.52.5 dfsg-3ubuntu0.2
ubuntu/librsvg2-dev 2.52.5 dfsg-3ubuntu0.2
ubuntu/librtmp1 2.4 20151223.gitfa8646d.1-2build4
ubuntu/librttopo-dev 1.1.0-2
ubuntu/librttopo1 1.1.0-2
ubuntu/libsasl2-2 2.1.27 dfsg2-3ubuntu1.2
ubuntu/libsasl2-modules-db 2.1.27 dfsg2-3ubuntu1.2
ubuntu/libsasl2-modules 2.1.27 dfsg2-3ubuntu1.2
ubuntu/libseccomp2 2.5.3-2ubuntu2
ubuntu/libselinux1-dev 3.3-1build2
ubuntu/libselinux1 3.3-1build2
ubuntu/libsemanage-common 3.3-1build2
ubuntu/libsemanage2 3.3-1build2
ubuntu/libsensors-config 1:3.6.0-7ubuntu1
ubuntu/libsensors5 1:3.6.0-7ubuntu1
ubuntu/libsepol-dev 3.3-1build1
ubuntu/libsepol2 3.3-1build1
ubuntu/libsigsegv2 2.13-1ubuntu3
ubuntu/libsliplu1 1:5.10.1 dfsg-4build1
ubuntu/libsm-dev 2:1.2.3-1build2
ubuntu/libsm6 2:1.2.3-1build2
ubuntu/libsmartcols1 2.37.2-4ubuntu3
ubuntu/libsnappy1v5 1.1.8-1build3
ubuntu/libspatialite-dev 5.0.1-2build2
ubuntu/libspatialite7 5.0.1-2build2
ubuntu/libspqr2 1:5.10.1 dfsg-4build1
ubuntu/libsqlite3-0 3.37.2-2ubuntu0.1
ubuntu/libsqlite3-dev 3.37.2-2ubuntu0.1
ubuntu/libss2 1.46.5-2ubuntu1.1
ubuntu/libssh-4 0.9.6-2ubuntu0.22.04.1
ubuntu/libssh2-1-dev 1.10.0-3
ubuntu/libssh2-1 1.10.0-3
ubuntu/libssl-dev 3.0.2-0ubuntu1.12
ubuntu/libssl3 3.0.2-0ubuntu1.12
ubuntu/libstdc -11-dev 11.4.0-1ubuntu1~22.04
ubuntu/libstdc 6 12.3.0-1ubuntu1~22.04
ubuntu/libstemmer0d 2.2.0-1build1
ubuntu/libsuitesparse-dev 1:5.10.1 dfsg-4build1
ubuntu/libsuitesparseconfig5 1:5.10.1 dfsg-4build1
ubuntu/libsuperlu-dev 5.3.0 dfsg1-2
ubuntu/libsuperlu5 5.3.0 dfsg1-2
ubuntu/libsystemd0 249.11-0ubuntu3.10
ubuntu/libsz2 1.0.6-1
ubuntu/libtasn1-6 4.18.0-4build1
ubuntu/libtcl8.6 8.6.12 dfsg-1build1
ubuntu/libtext-iconv-perl 1.7-7build3
ubuntu/libthai-data 0.1.29-1build1
ubuntu/libthai0 0.1.29-1build1
ubuntu/libtie-ixhash-perl 1.23-2.1
ubuntu/libtiff-dev 4.3.0-6ubuntu0.6
ubuntu/libtiff5 4.3.0-6ubuntu0.6
ubuntu/libtiffxx5 4.3.0-6ubuntu0.6
ubuntu/libtimedate-perl 2.3300-2
ubuntu/libtinfo6 6.3-2ubuntu0.1
ubuntu/libtirpc-common 1.3.2-2ubuntu0.1
ubuntu/libtirpc-dev 1.3.2-2ubuntu0.1
ubuntu/libtirpc3 1.3.2-2ubuntu0.1
ubuntu/libtk8.6 8.6.12-1build1
ubuntu/libtool 2.4.6-15build2
ubuntu/libtry-tiny-perl 0.31-1
ubuntu/libtsan0 11.4.0-1ubuntu1~22.04
ubuntu/libu2f-udev 1.1.10-3build2
ubuntu/libubsan1 12.3.0-1ubuntu1~22.04
ubuntu/libudev1 249.11-0ubuntu3.10
ubuntu/libudunits2-0 2.2.28-3
ubuntu/libudunits2-data 2.2.28-3
ubuntu/libudunits2-dev 2.2.28-3
ubuntu/libumfpack5 1:5.10.1 dfsg-4build1
ubuntu/libunistring2 1.0-1
ubuntu/libunwind8 1.3.2-2build2.1
ubuntu/liburi-perl 5.10-1
ubuntu/liburiparser-dev 0.9.6 dfsg-1
ubuntu/liburiparser1 0.9.6 dfsg-1
ubuntu/libutempter0 1.2.1-2build2
ubuntu/libuuid1 2.37.2-4ubuntu3
ubuntu/libuv1-dev 1.43.0-1
ubuntu/libuv1 1.43.0-1
ubuntu/libvulkan1 1.3.204.1-2
ubuntu/libwayland-client0 1.20.0-1ubuntu0.1
ubuntu/libwayland-cursor0 1.20.0-1ubuntu0.1
ubuntu/libwayland-egl1 1.20.0-1ubuntu0.1
ubuntu/libwayland-server0 1.20.0-1ubuntu0.1
ubuntu/libwebp-dev 1.2.2-2ubuntu0.22.04.2
ubuntu/libwebp7 1.2.2-2ubuntu0.22.04.2
ubuntu/libwebpdemux2 1.2.2-2ubuntu0.22.04.2
ubuntu/libwebpmux3 1.2.2-2ubuntu0.22.04.2
ubuntu/libwmflite-0.2-7 0.2.12-5ubuntu1
ubuntu/libwww-perl 6.61-1
ubuntu/libwww-robotrules-perl 6.02-1
ubuntu/libx11-6 2:1.7.5-1ubuntu0.3
ubuntu/libx11-data 2:1.7.5-1ubuntu0.3
ubuntu/libx11-dev 2:1.7.5-1ubuntu0.3
ubuntu/libx11-protocol-perl 0.56-7.1
ubuntu/libx11-xcb1 2:1.7.5-1ubuntu0.3
ubuntu/libx265-199 3.5-2
ubuntu/libx265-dev 3.5-2
ubuntu/libxau-dev 1:1.0.9-1build5
ubuntu/libxau6 1:1.0.9-1build5
ubuntu/libxaw7 2:1.0.14-1
ubuntu/libxcb-dri2-0 1.14-3ubuntu3
ubuntu/libxcb-dri3-0 1.14-3ubuntu3
ubuntu/libxcb-glx0 1.14-3ubuntu3
ubuntu/libxcb-present0 1.14-3ubuntu3
ubuntu/libxcb-randr0 1.14-3ubuntu3
ubuntu/libxcb-render0-dev 1.14-3ubuntu3
ubuntu/libxcb-render0 1.14-3ubuntu3
ubuntu/libxcb-shape0 1.14-3ubuntu3
ubuntu/libxcb-shm0-dev 1.14-3ubuntu3
ubuntu/libxcb-shm0 1.14-3ubuntu3
ubuntu/libxcb-sync1 1.14-3ubuntu3
ubuntu/libxcb-xfixes0 1.14-3ubuntu3
ubuntu/libxcb1-dev 1.14-3ubuntu3
ubuntu/libxcb1 1.14-3ubuntu3
ubuntu/libxcomposite1 1:0.4.5-1build2
ubuntu/libxcursor1 1:1.2.0-2build4
ubuntu/libxdamage1 1:1.1.5-2build2
ubuntu/libxdmcp-dev 1:1.1.3-0ubuntu5
ubuntu/libxdmcp6 1:1.1.3-0ubuntu5
ubuntu/libxerces-c-dev 3.2.3 debian-3build1
ubuntu/libxerces-c3.2 3.2.3 debian-3build1
ubuntu/libxext-dev 2:1.3.4-1build1
ubuntu/libxext6 2:1.3.4-1build1
ubuntu/libxfixes3 1:6.0.0-1
ubuntu/libxfont2 1:2.0.5-1build1
ubuntu/libxft-dev 2.3.4-1
ubuntu/libxft2 2.3.4-1
ubuntu/libxi6 2:1.8-1build1
ubuntu/libxinerama1 2:1.1.4-3
ubuntu/libxkbcommon0 1.4.0-1
ubuntu/libxkbfile1 1:1.1.0-1build3
ubuntu/libxml-parser-perl 2.46-3build1
ubuntu/libxml-twig-perl 1:3.52-1
ubuntu/libxml-xpathengine-perl 0.14-1
ubuntu/libxml2-dev 2.9.13 dfsg-1ubuntu0.3
ubuntu/libxml2 2.9.13 dfsg-1ubuntu0.3
ubuntu/libxmlb2 0.3.6-2build1
ubuntu/libxmu6 2:1.1.3-3
ubuntu/libxmuu1 2:1.1.3-3
ubuntu/libxpm4 1:3.5.12-1ubuntu0.22.04.2
ubuntu/libxrandr2 2:1.5.2-1build1
ubuntu/libxrender-dev 1:0.9.10-1build4
ubuntu/libxrender1 1:0.9.10-1build4
ubuntu/libxshmfence1 1.3-1build4
ubuntu/libxss-dev 1:1.2.3-1build2
ubuntu/libxss1 1:1.2.3-1build2
ubuntu/libxt-dev 1:1.2.1-1
ubuntu/libxt6 1:1.2.1-1
ubuntu/libxtst6 2:1.2.3-1build4
ubuntu/libxv1 2:1.0.11-1build2
ubuntu/libxxf86dga1 2:1.1.5-0ubuntu3
ubuntu/libxxf86vm1 1:1.1.4-1build3
ubuntu/libxxhash0 0.8.1-1
ubuntu/libyaml-0-2 0.2.2-1build2
ubuntu/libzstd-dev 1.4.8 dfsg-3build1
ubuntu/libzstd1 1.4.8 dfsg-3build1
ubuntu/linux-libc-dev 5.15.0-87.97
ubuntu/locales 2.35-0ubuntu3.4
ubuntu/login 1:4.8.1-2ubuntu2.1
ubuntu/logsave 1.46.5-2ubuntu1.1
ubuntu/lsb-base 11.1.0ubuntu4
ubuntu/lsb-release 11.1.0ubuntu4
ubuntu/lto-disabled-list 24
ubuntu/m17n-db 1.8.0-3
ubuntu/m4 1.4.18-5ubuntu2
ubuntu/make 4.3-4.1build1
ubuntu/manpages-dev 5.10-1ubuntu1
ubuntu/manpages 5.10-1ubuntu1
ubuntu/mawk 1.3.4.20200120-3
ubuntu/media-types 7.0.0
ubuntu/mesa-vulkan-drivers 23.0.4-0ubuntu1~22.04.1
ubuntu/mount 2.37.2-4ubuntu3
ubuntu/mysql-common 5.8 1.0.8
ubuntu/ncurses-base 6.3-2ubuntu0.1
ubuntu/ncurses-bin 6.3-2ubuntu0.1
ubuntu/netbase 6.3
ubuntu/netpbm 2:10.0-15.4
ubuntu/networkd-dispatcher 2.1-2ubuntu0.22.04.2
ubuntu/openjdk-11-jre-headless 11.0.20.1 1-0ubuntu1~22.04
ubuntu/openssh-client 1:8.9p1-3ubuntu0.4
ubuntu/openssl 3.0.2-0ubuntu1.12
ubuntu/packagekit-tools 1.2.5-2ubuntu2
ubuntu/packagekit 1.2.5-2ubuntu2
ubuntu/pandoc-citeproc 0.17.0.1-1build5
ubuntu/pandoc-data 2.9.2.1-3ubuntu2
ubuntu/pandoc 2.9.2.1-3ubuntu2
ubuntu/passwd 1:4.8.1-2ubuntu2.1
ubuntu/patch 2.7.6-7build2
ubuntu/pdftk-java 3.2.2-1
ubuntu/perl-base 5.34.0-3ubuntu1.2
ubuntu/perl-modules-5.34 5.34.0-3ubuntu1.2
ubuntu/perl-openssl-defaults 5build2
ubuntu/perl 5.34.0-3ubuntu1.2
ubuntu/pinentry-curses 1.1.1-1build2
ubuntu/pkexec 0.105-33
ubuntu/pkg-config 0.29.2-1ubuntu3
ubuntu/policykit-1 0.105-33
ubuntu/polkitd 0.105-33
ubuntu/poppler-data 0.4.11-1
ubuntu/procps 2:3.3.17-6ubuntu2
ubuntu/proj-bin 8.2.1-1
ubuntu/proj-data 8.2.1-1
ubuntu/publicsuffix 20211207.1025-1
ubuntu/python-apt-common 2.4.0ubuntu2
ubuntu/python-is-python3 3.9.2-2
ubuntu/python3-apt 2.4.0ubuntu2
ubuntu/python3-blinker 1.4 dfsg1-0.4
ubuntu/python3-cffi-backend 1.15.0-1build2
ubuntu/python3-chardet 4.0.0-1
ubuntu/python3-cryptography 3.4.8-1ubuntu2
ubuntu/python3-dbus 1.2.18-3build1
ubuntu/python3-debian 0.1.43ubuntu1.1
ubuntu/python3-dev 3.10.6-1~22.04
ubuntu/python3-distro-info 1.1ubuntu0.1
ubuntu/python3-distro 1.7.0-1
ubuntu/python3-distutils 3.10.8-1~22.04
ubuntu/python3-gi 3.42.1-0ubuntu1
ubuntu/python3-httplib2 0.20.2-2
ubuntu/python3-importlib-metadata 4.6.4-1
ubuntu/python3-jeepney 0.7.1-3
ubuntu/python3-jwt 2.3.0-1ubuntu0.2
ubuntu/python3-keyring 23.5.0-1
ubuntu/python3-launchpadlib 1.10.16-1
ubuntu/python3-lazr.restfulclient 0.14.4-1
ubuntu/python3-lazr.uri 1.0.6-2
ubuntu/python3-lib2to3 3.10.8-1~22.04
ubuntu/python3-minimal 3.10.6-1~22.04
ubuntu/python3-more-itertools 8.10.0-2
ubuntu/python3-oauthlib 3.2.0-1ubuntu0.1
ubuntu/python3-pip 22.0.2 dfsg-1ubuntu0.3
ubuntu/python3-pkg-resources 59.6.0-1.2ubuntu0.22.04.1
ubuntu/python3-pyparsing 2.4.7-1
ubuntu/python3-secretstorage 3.3.1-1
ubuntu/python3-setuptools 59.6.0-1.2ubuntu0.22.04.1
ubuntu/python3-six 1.16.0-3ubuntu1
ubuntu/python3-software-properties 0.99.22.7
ubuntu/python3-wadllib 1.3.6-1
ubuntu/python3-wheel 0.37.1-2ubuntu0.22.04.1
ubuntu/python3-zipp 1.0.0-3
ubuntu/python3.10-dev 3.10.12-1~22.04.2
ubuntu/python3.10-minimal 3.10.12-1~22.04.2
ubuntu/python3.10 3.10.12-1~22.04.2
ubuntu/python3 3.10.6-1~22.04
ubuntu/r-base-core 4.1.2-1ubuntu2
ubuntu/r-base-dev 4.1.2-1ubuntu2
ubuntu/r-base-html 4.1.2-1ubuntu2
ubuntu/r-base 4.1.2-1ubuntu2
ubuntu/r-cran-boot 1.3-28-2
ubuntu/r-cran-class 7.3-20-1
ubuntu/r-cran-cluster 2.1.2-2
ubuntu/r-cran-codetools 0.2-18-1
ubuntu/r-cran-foreign 0.8.82-1
ubuntu/r-cran-kernsmooth 2.23-20-1
ubuntu/r-cran-lattice 0.20-45-1
ubuntu/r-cran-mass 7.3-55-1
ubuntu/r-cran-matrix 1.4-0-1
ubuntu/r-cran-mgcv 1.8-39-1
ubuntu/r-cran-nlme 3.1.155-1
ubuntu/r-cran-nnet 7.3-17-1
ubuntu/r-cran-rpart 4.1.16-1
ubuntu/r-cran-spatial 7.3-15-1
ubuntu/r-cran-survival 3.2-13-1
ubuntu/r-doc-html 4.1.2-1ubuntu2
ubuntu/r-recommended 4.1.2-1ubuntu2
ubuntu/readline-common 8.1.2-1
ubuntu/rpcsvc-proto 1.4.2-0ubuntu6
ubuntu/sed 4.8-1ubuntu2
ubuntu/sensible-utils 0.0.17
ubuntu/session-migration 0.3.6
ubuntu/shared-mime-info 2.1-2
ubuntu/software-properties-common 0.99.22.7
ubuntu/systemd-hwe-hwdb 249.11.3
ubuntu/systemd-sysv 249.11-0ubuntu3.10
ubuntu/systemd-timesyncd 249.11-0ubuntu3.10
ubuntu/systemd 249.11-0ubuntu3.10
ubuntu/sysvinit-utils 3.01-1ubuntu1
ubuntu/tar 1.34 dfsg-1ubuntu0.1.22.04.1
ubuntu/tcl-dev 8.6.11 1build2
ubuntu/tcl8.6-dev 8.6.12 dfsg-1build1
ubuntu/tcl8.6 8.6.12 dfsg-1build1
ubuntu/tcl 8.6.11 1build2
ubuntu/tk-dev 8.6.11 1build2
ubuntu/tk8.6-dev 8.6.12-1build1
ubuntu/tk8.6 8.6.12-1build1
ubuntu/tk 8.6.11 1build2
ubuntu/tzdata 2023c-0ubuntu0.22.04.2
ubuntu/ubuntu-keyring 2021.03.26
ubuntu/ubuntu-mono 20.10-0ubuntu2
ubuntu/ucf 3.0043
ubuntu/udev 249.11-0ubuntu3.10
ubuntu/unattended-upgrades 2.8ubuntu1
ubuntu/unixodbc-common 2.3.9-5
ubuntu/unixodbc-dev 2.3.9-5
ubuntu/unzip 6.0-26ubuntu3.1
ubuntu/usrmerge 25ubuntu2
ubuntu/util-linux 2.37.2-4ubuntu3
ubuntu/uuid-dev 2.37.2-4ubuntu3
ubuntu/vim-common 2:8.2.3995-1ubuntu2.12
ubuntu/vim-tiny 2:8.2.3995-1ubuntu2.12
ubuntu/wget 1.21.2-2ubuntu1
ubuntu/x11-common 1:7.7 23ubuntu2
ubuntu/x11-utils 7.7 5build2
ubuntu/x11-xkb-utils 7.7 5build4
ubuntu/x11-xserver-utils 7.7 9build1
ubuntu/x11proto-dev 2021.5-1
ubuntu/xauth 1:1.1-1build2
ubuntu/xbitmaps 1.1.1-2.1ubuntu1
ubuntu/xdg-user-dirs 0.17-2ubuntu4
ubuntu/xdg-utils 1.1.3-4.1ubuntu3~22.04.1
ubuntu/xfonts-base 1:1.0.5
ubuntu/xfonts-encodings 1:1.0.5-0ubuntu2
ubuntu/xfonts-utils 1:7.7 6build2
ubuntu/xkb-data 2.33-1
ubuntu/xorg-sgml-doctools 1:1.11-1.1
ubuntu/xserver-common 2:21.1.4-2ubuntu1.7~22.04.1
ubuntu/xterm 372-1ubuntu1
ubuntu/xtrans-dev 1.4.0-1
ubuntu/xvfb 2:21.1.4-2ubuntu1.7~22.04.1
ubuntu/xxd 2:8.2.3995-1ubuntu2.12
ubuntu/xz-utils 5.2.5-2ubuntu1
ubuntu/zip 3.0-12build2
ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu9.2
ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu9.2
ubuntu/zstd 1.4.8 dfsg-3build1

bootstrap-sass 3.4.1
bootstrap-colorpicker 3.4.0
bootstrap-accessibility-plugin 1.0.6
bootstrap 4.6.0
bootstrap 5.2.2
bootswatch 3.4.1
bootswatch 4.6.0
bootswatch 5.2.2
casperjs 1.1.0-beta5
core-js 2.5.1
jupyterlab-plotly 5.17.0
react-json-view 1.15.2
vanilla-jsoneditor 0.18.7

bash 5.1.16
openssl 3.0.11
openssl 3.1.4
python 3.11.5
python 3.9.18

com.gitlab.pdftk_java.pdftk:pdftk *
jrt-fs:jrt-fs 11.0.20.1
org.apache.commons:commons-lang3 3.11
org.bouncycastle:bcprov 1.68
org.debian.security.UpdateCertificates:ca-certificates-java *

conda-package-handling 2.2.0

ecosyste.ms

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Docker

bigomics/omicsplayground-base : ub2204_v2

Dependencies