andrewrrelmore/genepi_vscode : test

Latest release: almost 3 years ago - 67 downloads - 1,188 dependencies

Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
AnnotationDbi 1.60.2
BH 1.81.0-1
BSgenome 1.66.3
Biobase 2.58.0
BiocFileCache 2.6.1
BiocGenerics 0.44.0
BiocIO 1.8.0
BiocManager 1.30.22
BiocParallel 1.32.6
BiocVersion 3.16.0
Biostrings 2.66.0
Cairo 1.6-1
CompQuadForm 1.4.3
DBI 1.1.3
DEoptimR 1.1-2
DNAcopy 1.72.3
DelayedArray 0.24.0
EasyQC 23.8
GENESIS 2.28.0
GWASExactHW 1.01
GWASTools 1.44.0
GenomeInfoDb 1.34.9
GenomeInfoDbData 1.2.9
GenomicAlignments 1.34.1
GenomicFeatures 1.50.4
GenomicRanges 1.50.2
IRanges 2.32.0
KEGGREST 1.38.0
KernSmooth 2.23-20
MASS 7.3-58.2
MRMix 0.1.0
MRPRESSO 1.0
Matrix 1.5-3
Matrix 1.6-1
MatrixGenerics 1.10.0
MatrixModels 0.5-2
MendelianRandomization 0.9.0
R.methodsS3 1.8.2
R.oo 1.25.0
R.utils 2.12.2
R6 2.5.1
RColorBrewer 1.1-3
RCurl 1.98-1.12
RSQLite 2.3.1
RadialMR 1.1
Rcpp 1.0.11
RcppArmadillo 0.12.6.3.0
RcppEigen 0.3.3.9.3
Rhtslib 2.0.0
Rsamtools 2.14.0
S4Vectors 0.36.2
SNPRelate 1.32.2
SeqArray 1.38.0
SeqVarTools 1.36.0
SlopeHunter 1.1.0
SparseM 1.81
SummarizedExperiment 1.28.0
TwoSampleMR 0.5.7
VariantAnnotation 1.44.1
XML 3.99-0.14
XVector 0.38.0
abind 1.4-5
argparser 0.7.1
arm 1.13-1
arrangements 1.1.9
askpass 1.2.0
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.2.2
biomaRt 2.54.1
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blob 1.2.4
boot 1.3-28.1
brew 1.0-8
brio 1.1.3
broom 1.0.5
bslib 0.5.1
cachem 1.0.8
calibrate 1.7.7
callr 3.7.3
checkmate 2.2.0
class 7.3-21
cli 3.6.1
clipr 0.8.0
cluster 2.1.4
coda 0.19-4
codetools 0.2-19
coloc 5.2.2
colorspace 2.1-0
commonmark 1.9.0
compiler 4.2.2
conflicted 1.2.0
corrplot 0.92
cowplot 1.1.1
cpp11 0.4.6
crayon 1.5.2
credentials 2.0.1
crosstalk 1.2.0
curl 5.0.2
data.table 1.14.8
datasets 4.2.2
dbplyr 2.3.3
desc 1.4.2
devtools 2.4.5
diffobj 0.3.5
digest 0.6.31
digest 0.6.33
downlit 0.4.3
dplyr 1.1.3
eeptools 1.2.5
ellipsis 0.3.2
evaluate 0.21
fansi 1.0.4
farver 2.1.1
fastmap 1.1.1
filelock 1.0.2
fontawesome 0.5.2
forcats 1.0.0
foreach 1.5.2
foreign 0.8-84
forestplot 3.1.3
formatR 1.14
formula.tools 1.7.1
fs 1.6.1
fs 1.6.3
futile.logger 1.4.3
futile.options 1.0.1
gargle 1.5.2
gdsfmt 1.34.1
generics 0.1.3
gert 1.9.3
ggplot2 3.4.3
gh 1.4.0
gitcreds 0.1.2
glmnet 4.1-8
glue 1.6.2
gmp 0.7-2
googleAuthR 2.0.1
grDevices 4.2.2
graphics 4.2.2
grid 4.2.2
gridExtra 2.3
gtable 0.3.4
gwasurvivr 1.1
haven 2.5.3
highr 0.10
hms 1.1.3
htmltools 0.5.4
htmltools 0.5.6
htmlwidgets 1.6.2
httpuv 1.6.11
httr2 0.2.3
httr 1.4.7
ieugwasr 0.1.5
igraph 1.5.1
ini 0.3.1
irlba 2.3.5.1
isoband 0.2.7
iterators 1.0.14
iterpc 0.4.2
jomo 2.7-6
jquerylib 0.1.4
jsonlite 1.8.7
knitr 1.43
labeling 0.4.3
lambda.r 1.2.4
later 1.3.1
lattice 0.20-45
lazyeval 0.2.2
lifecycle 1.0.3
lme4 1.1-34
lmtest 0.9-40
logistf 1.26.0
magrittr 2.0.3
mathjaxr 1.6-0
matrixStats 1.0.0
mclust 6.0.0
memoise 2.0.1
meta 6.5-0
metadat 1.2-0
metafor 4.2-0
methods 4.2.2
mgcv 1.8-41
mice 3.16.0
mime 0.12
miniUI 0.1.1.1
minqa 1.2.5
mitml 0.4-5
mixsqp 0.3-48
mnormt 2.1.1
mr.raps 0.2
munsell 0.5.0
nlme 3.1-162
nloptr 2.0.3
nnet 7.3-18
nortest 1.0-4
numDeriv 2016.8-1.1
openssl 2.1.0
operator.tools 1.6.3
ordinal 2022.11-16
org.testing.db 0.1
pan 1.9
parallel 4.2.2
pbapply 1.7-2
phenoscanner 1.0
pillar 1.9.0
pkgbuild 1.4.2
pkgconfig 2.0.3
pkgdown 2.0.7
pkgload 1.3.2.1
plogr 0.2.0
plotly 4.10.2
plotrix 3.8-2
plyr 1.8.8
png 0.1-8
praise 1.0.0
prettydoc 0.4.1
prettyunits 1.1.1
processx 3.8.2
profvis 0.3.8
progress 1.2.2
promises 1.2.1
ps 1.7.5
psych 2.3.6
purrr 1.0.2
qqman 0.1.9
quantreg 5.97
quantsmooth 1.64.0
ragg 1.2.5
rappdirs 0.3.3
rcmdcheck 1.4.0
readr 2.1.4
rematch2 2.1.2
remotes 2.4.2.1
reshape2 1.4.4
reshape 0.8.9
restfulr 0.0.15
rjson 0.2.21
rlang 1.0.6
rlang 1.1.1
rmarkdown 2.24
robustbase 0.99-0
roxygen2 7.2.3
rpart 4.1.19
rprojroot 2.0.3
rstudioapi 0.15.0
rtracklayer 1.58.0
rversions 2.1.2
sandwich 3.0-2
sass 0.4.5
sass 0.4.7
scales 1.2.1
sessioninfo 1.2.2
shape 1.4.6
shiny 1.7.5
snow 0.4-4
sourcetools 0.1.7-1
spatial 7.3-16
splines 4.2.2
stats4 4.2.2
stats 4.2.2
stringi 1.7.12
stringr 1.5.0
survival 3.5-3
susieR 0.12.35
sys 3.4.2
systemfonts 1.0.4
tcltk 4.2.2
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.10
textshaping 0.3.6
tibble 3.2.1
tidyr 1.3.0
tidyselect 1.2.0
tinytex 0.46
tools 4.2.2
translations 4.2.2
tzdb 0.4.0
ucminf 1.2.0
urlchecker 1.0.1
usethis 2.2.2
utf8 1.2.3
utils 4.2.2
vcd 1.4-11
vctrs 0.6.3
viridis 0.6.4
viridisLite 0.4.2
vroom 1.6.3
waldo 0.5.1
whisker 0.4.1
withr 2.5.0
xfun 0.40
xml2 1.3.5
xopen 1.0.0
xtable 1.8-4
yaml 2.3.7
zip 2.3.0
zlibbioc 1.44.0
zoo 1.8-12

bash 5.2.15
node 18.17.1
python 3.11.5

click 8.1.3
snakemake 7.25.4
synapseclient 2.7.2

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andrewrrelmore/genepi_vscode : test

Dependencies